Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PDGFAP04085 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.92■□□□□ 0.62
PDGFAP04085 AC105020.6-201ENST00000621523 1217 ntBASIC18.92■□□□□ 0.62
PDGFAP04085 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
PDGFAP04085 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 AC007952.6-201ENST00000573168 2673 ntBASIC18.92■□□□□ 0.62
PDGFAP04085 AC003957.1-201ENST00000625108 2673 ntBASIC18.92■□□□□ 0.62
PDGFAP04085 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PDGFAP04085 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDGFAP04085 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDGFAP04085 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDGFAP04085 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDGFAP04085 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFAP04085 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFAP04085 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFAP04085 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFAP04085 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFAP04085 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PDGFAP04085 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.91■□□□□ 0.62
PDGFAP04085 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.91■□□□□ 0.62
PDGFAP04085 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDGFAP04085 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.91■□□□□ 0.62
PDGFAP04085 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.91■□□□□ 0.62
PDGFAP04085 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFAP04085 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 TSPY7P-201ENST00000431358 1114 ntBASIC18.9■□□□□ 0.62
PDGFAP04085 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.9■□□□□ 0.62
PDGFAP04085 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.9■□□□□ 0.62
PDGFAP04085 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PDGFAP04085 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
PDGFAP04085 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.9■□□□□ 0.62
PDGFAP04085 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDGFAP04085 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDGFAP04085 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDGFAP04085 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDGFAP04085 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFAP04085 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.89■□□□□ 0.61
PDGFAP04085 BX088651.1-201ENST00000540551 451 ntBASIC18.89■□□□□ 0.61
PDGFAP04085 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFAP04085 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFAP04085 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.89■□□□□ 0.61
PDGFAP04085 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFAP04085 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFAP04085 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.89■□□□□ 0.61
PDGFAP04085 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDGFAP04085 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDGFAP04085 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDGFAP04085 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms