Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC092666.2-201ENST00000613287 246 ntBASIC18.75■□□□□ 0.59
NKX2-2O95096 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX2-2O95096 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 AC073130.3-201ENST00000624389 2278 ntBASIC18.75■□□□□ 0.59
NKX2-2O95096 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-2O95096 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NKX2-2O95096 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NKX2-2O95096 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX2-2O95096 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-2O95096 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.74■□□□□ 0.59
NKX2-2O95096 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 AL589743.5-201ENST00000616611 1050 ntBASIC18.74■□□□□ 0.59
NKX2-2O95096 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-2O95096 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NKX2-2O95096 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX2-2O95096 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 SMG8-203ENST00000578922 2178 ntBASIC18.74■□□□□ 0.59
NKX2-2O95096 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-2O95096 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NKX2-2O95096 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-2O95096 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-2O95096 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.73■□□□□ 0.59
NKX2-2O95096 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX2-2O95096 AC105036.2-201ENST00000569468 176 ntBASIC18.73■□□□□ 0.59
NKX2-2O95096 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX2-2O95096 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.73■□□□□ 0.59
NKX2-2O95096 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-2O95096 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-2O95096 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-2O95096 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-2O95096 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NKX2-2O95096 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-2O95096 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NKX2-2O95096 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.72■□□□□ 0.59
NKX2-2O95096 KRT17P1-201ENST00000399211 1546 ntBASIC18.72■□□□□ 0.59
NKX2-2O95096 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-2O95096 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NKX2-2O95096 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-2O95096 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NKX2-2O95096 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-2O95096 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-2O95096 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-2O95096 MKRN4P-201ENST00000444706 1521 ntBASIC18.71■□□□□ 0.59
NKX2-2O95096 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX2-2O95096 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NKX2-2O95096 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-2O95096 AC006970.2-201ENST00000450065 779 ntBASIC18.71■□□□□ 0.59
NKX2-2O95096 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX2-2O95096 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.71■□□□□ 0.59
NKX2-2O95096 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NKX2-2O95096 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX2-2O95096 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NKX2-2O95096 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
NKX2-2O95096 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX2-2O95096 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NKX2-2O95096 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-2O95096 AC099778.1-201ENST00000568593 1911 ntBASIC18.7■□□□□ 0.58
NKX2-2O95096 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX2-2O95096 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX2-2O95096 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NKX2-2O95096 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms