Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1BO75841 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.69■□□□□ 0.42
UPK1BO75841 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
UPK1BO75841 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UPK1BO75841 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UPK1BO75841 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UPK1BO75841 AC104581.1-202ENST00000635932 2618 ntBASIC17.68■□□□□ 0.42
UPK1BO75841 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1BO75841 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UPK1BO75841 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1BO75841 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UPK1BO75841 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 AC009113.1-201ENST00000570267 2443 ntBASIC17.68■□□□□ 0.42
UPK1BO75841 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.68■□□□□ 0.42
UPK1BO75841 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPK1BO75841 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
UPK1BO75841 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1BO75841 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1BO75841 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1BO75841 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.67■□□□□ 0.42
UPK1BO75841 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UPK1BO75841 AC011484.1-201ENST00000377652 1995 ntBASIC17.67■□□□□ 0.42
UPK1BO75841 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.67■□□□□ 0.42
UPK1BO75841 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
UPK1BO75841 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPK1BO75841 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UPK1BO75841 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.66■□□□□ 0.42
UPK1BO75841 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPK1BO75841 AC020763.4-201ENST00000623414 4170 ntBASIC17.66■□□□□ 0.42
UPK1BO75841 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.66■□□□□ 0.42
UPK1BO75841 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UPK1BO75841 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UPK1BO75841 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPK1BO75841 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 AC009102.2-201ENST00000606772 1639 ntBASIC17.65■□□□□ 0.42
UPK1BO75841 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 CROCCP3-202ENST00000420820 1947 ntBASIC17.65■□□□□ 0.42
UPK1BO75841 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UPK1BO75841 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
UPK1BO75841 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UPK1BO75841 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.65■□□□□ 0.42
UPK1BO75841 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms