Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.83■□□□□ 0.61
TRIM3O75382 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM3O75382 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 AC073210.2-201ENST00000430369 194 ntBASIC18.83■□□□□ 0.6
TRIM3O75382 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM3O75382 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM3O75382 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM3O75382 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM3O75382 AC100791.3-201ENST00000617619 330 ntBASIC18.83■□□□□ 0.6
TRIM3O75382 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM3O75382 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM3O75382 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM3O75382 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM3O75382 AC116050.2-201ENST00000612102 1779 ntBASIC18.83■□□□□ 0.6
TRIM3O75382 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM3O75382 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM3O75382 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM3O75382 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM3O75382 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM3O75382 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM3O75382 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM3O75382 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM3O75382 AL049796.1-201ENST00000565336 1766 ntBASIC18.82■□□□□ 0.6
TRIM3O75382 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM3O75382 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM3O75382 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM3O75382 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM3O75382 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.82■□□□□ 0.6
TRIM3O75382 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM3O75382 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM3O75382 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM3O75382 MIR4758-201ENST00000577688 71 ntBASIC18.81■□□□□ 0.6
TRIM3O75382 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM3O75382 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM3O75382 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM3O75382 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM3O75382 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM3O75382 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM3O75382 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM3O75382 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM3O75382 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM3O75382 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM3O75382 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM3O75382 BX276092.2-201ENST00000417668 665 ntBASIC18.8■□□□□ 0.6
TRIM3O75382 AC069152.1-201ENST00000438030 544 ntBASIC18.8■□□□□ 0.6
TRIM3O75382 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM3O75382 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.8■□□□□ 0.6
TRIM3O75382 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM3O75382 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 AC092118.2-201ENST00000613495 667 ntBASIC18.8■□□□□ 0.6
TRIM3O75382 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM3O75382 AC133041.1-202ENST00000642053 222 ntBASIC18.8■□□□□ 0.6
TRIM3O75382 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM3O75382 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TRIM3O75382 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM3O75382 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM3O75382 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.79■□□□□ 0.6
TRIM3O75382 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM3O75382 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.79■□□□□ 0.6
TRIM3O75382 AC098934.4-201ENST00000564127 592 ntBASIC18.79■□□□□ 0.6
TRIM3O75382 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM3O75382 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM3O75382 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM3O75382 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM3O75382 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM3O75382 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM3O75382 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms