Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF253O75346 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 MIR572-201ENST00000384983 95 ntBASIC15.72■□□□□ 0.11
ZNF253O75346 AC099791.1-201ENST00000416440 715 ntBASIC15.72■□□□□ 0.11
ZNF253O75346 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.72■□□□□ 0.11
ZNF253O75346 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF253O75346 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ZNF253O75346 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.72■□□□□ 0.11
ZNF253O75346 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF253O75346 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 AC027702.1-201ENST00000563810 1770 ntBASIC15.72■□□□□ 0.11
ZNF253O75346 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF253O75346 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.72■□□□□ 0.11
ZNF253O75346 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF253O75346 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF253O75346 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF253O75346 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF253O75346 TSPY26P-201ENST00000476365 1326 ntBASIC15.71■□□□□ 0.11
ZNF253O75346 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ZNF253O75346 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.71■□□□□ 0.11
ZNF253O75346 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ZNF253O75346 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ZNF253O75346 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ZNF253O75346 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF253O75346 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
ZNF253O75346 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.71■□□□□ 0.11
ZNF253O75346 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF253O75346 AC008764.7-201ENST00000593779 1081 ntBASIC15.71■□□□□ 0.11
ZNF253O75346 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF253O75346 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.71■□□□□ 0.11
ZNF253O75346 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF253O75346 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF253O75346 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF253O75346 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.71■□□□□ 0.1
ZNF253O75346 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF253O75346 AC098818.2-201ENST00000564925 2320 ntBASIC15.71■□□□□ 0.1
ZNF253O75346 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.7■□□□□ 0.1
ZNF253O75346 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF253O75346 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF253O75346 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF253O75346 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF253O75346 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF253O75346 EDA-201ENST00000338901 1233 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms