Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SSNA1O43805 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SSNA1O43805 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSNA1O43805 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SSNA1O43805 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.27■□□□□ 0.36
SSNA1O43805 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SSNA1O43805 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 MIR639-201ENST00000384974 98 ntBASIC17.27■□□□□ 0.36
SSNA1O43805 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SSNA1O43805 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSNA1O43805 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SSNA1O43805 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSNA1O43805 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSNA1O43805 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.27■□□□□ 0.35
SSNA1O43805 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SSNA1O43805 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSNA1O43805 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SSNA1O43805 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.27■□□□□ 0.35
SSNA1O43805 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.26■□□□□ 0.35
SSNA1O43805 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSNA1O43805 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.26■□□□□ 0.35
SSNA1O43805 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SSNA1O43805 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SSNA1O43805 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SSNA1O43805 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSNA1O43805 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.25■□□□□ 0.35
SSNA1O43805 AC009102.2-201ENST00000606772 1639 ntBASIC17.25■□□□□ 0.35
SSNA1O43805 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 AC005332.8-201ENST00000622750 2735 ntBASIC17.25■□□□□ 0.35
SSNA1O43805 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSNA1O43805 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SSNA1O43805 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 LTB4R2-202ENST00000528054 3092 ntBASIC17.24■□□□□ 0.35
SSNA1O43805 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms