Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LST1O00453 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LST1O00453 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LST1O00453 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.2□□□□□ -0.3
LST1O00453 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LST1O00453 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
LST1O00453 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LST1O00453 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.19□□□□□ -0.3
LST1O00453 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 GPX1-201ENST00000419349 1106 ntBASIC13.19□□□□□ -0.3
LST1O00453 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LST1O00453 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LST1O00453 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.19□□□□□ -0.3
LST1O00453 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
LST1O00453 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
LST1O00453 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 AF131216.4-201ENST00000638924 1588 ntBASIC13.19□□□□□ -0.3
LST1O00453 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LST1O00453 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
LST1O00453 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 BCL2-203ENST00000589955 5011 ntBASIC13.18□□□□□ -0.3
LST1O00453 AC092720.2-201ENST00000602388 1665 ntBASIC13.18□□□□□ -0.3
LST1O00453 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LST1O00453 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LST1O00453 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LST1O00453 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
LST1O00453 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.18□□□□□ -0.3
LST1O00453 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.18□□□□□ -0.3
LST1O00453 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LST1O00453 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
LST1O00453 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LST1O00453 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.17□□□□□ -0.3
LST1O00453 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.17□□□□□ -0.3
LST1O00453 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LST1O00453 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
LST1O00453 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.17□□□□□ -0.3
LST1O00453 AL133373.2-201ENST00000623187 2828 ntBASIC13.17□□□□□ -0.3
LST1O00453 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
LST1O00453 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LST1O00453 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LST1O00453 AC135050.7-201ENST00000624508 2218 ntBASIC13.17□□□□□ -0.3
LST1O00453 LINC01465-201ENST00000408887 1940 ntBASIC13.17□□□□□ -0.3
LST1O00453 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms