Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3FO00303 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3FO00303 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.84■□□□□ 0.77
EIF3FO00303 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.84■□□□□ 0.77
EIF3FO00303 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.84■□□□□ 0.77
EIF3FO00303 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3FO00303 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.84■□□□□ 0.77
EIF3FO00303 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3FO00303 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
EIF3FO00303 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3FO00303 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.84■□□□□ 0.77
EIF3FO00303 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3FO00303 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
EIF3FO00303 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.83■□□□□ 0.77
EIF3FO00303 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.83■□□□□ 0.77
EIF3FO00303 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
EIF3FO00303 AL589743.5-201ENST00000616611 1050 ntBASIC19.83■□□□□ 0.77
EIF3FO00303 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.83■□□□□ 0.76
EIF3FO00303 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.83■□□□□ 0.76
EIF3FO00303 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
EIF3FO00303 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.83■□□□□ 0.76
EIF3FO00303 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EIF3FO00303 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3FO00303 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3FO00303 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3FO00303 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EIF3FO00303 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.82■□□□□ 0.76
EIF3FO00303 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EIF3FO00303 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
EIF3FO00303 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
EIF3FO00303 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
EIF3FO00303 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.81■□□□□ 0.76
EIF3FO00303 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 DPP3P2-201ENST00000416030 1696 ntBASIC19.81■□□□□ 0.76
EIF3FO00303 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.81■□□□□ 0.76
EIF3FO00303 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3FO00303 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
EIF3FO00303 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
EIF3FO00303 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.8■□□□□ 0.76
EIF3FO00303 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
EIF3FO00303 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.8■□□□□ 0.76
EIF3FO00303 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.8■□□□□ 0.76
EIF3FO00303 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
EIF3FO00303 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms