Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
DFFAO00273 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.84■□□□□ 0.93
DFFAO00273 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.84■□□□□ 0.93
DFFAO00273 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 AP005212.1-201ENST00000581547 1997 ntBASIC20.84■□□□□ 0.93
DFFAO00273 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.84■□□□□ 0.93
DFFAO00273 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DFFAO00273 KRT17P1-201ENST00000399211 1546 ntBASIC20.83■□□□□ 0.93
DFFAO00273 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DFFAO00273 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DFFAO00273 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.83■□□□□ 0.93
DFFAO00273 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DFFAO00273 AC020907.5-201ENST00000624372 1936 ntBASIC20.83■□□□□ 0.93
DFFAO00273 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.83■□□□□ 0.93
DFFAO00273 BX276092.2-201ENST00000417668 665 ntBASIC20.83■□□□□ 0.93
DFFAO00273 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.83■□□□□ 0.93
DFFAO00273 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.83■□□□□ 0.93
DFFAO00273 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.83■□□□□ 0.93
DFFAO00273 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.83■□□□□ 0.93
DFFAO00273 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DFFAO00273 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
DFFAO00273 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DFFAO00273 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DFFAO00273 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 SLC29A4P1-201ENST00000398760 971 ntBASIC20.82■□□□□ 0.92
DFFAO00273 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.82■□□□□ 0.92
DFFAO00273 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 AC105020.6-201ENST00000621523 1217 ntBASIC20.82■□□□□ 0.92
DFFAO00273 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.82■□□□□ 0.92
DFFAO00273 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.82■□□□□ 0.92
DFFAO00273 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.82■□□□□ 0.92
DFFAO00273 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DFFAO00273 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
DFFAO00273 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
DFFAO00273 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DFFAO00273 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DFFAO00273 LSM12P1-201ENST00000411836 588 ntBASIC20.81■□□□□ 0.92
DFFAO00273 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
DFFAO00273 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.81■□□□□ 0.92
DFFAO00273 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.81■□□□□ 0.92
DFFAO00273 AL589743.5-201ENST00000616611 1050 ntBASIC20.81■□□□□ 0.92
DFFAO00273 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.81■□□□□ 0.92
DFFAO00273 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
DFFAO00273 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DFFAO00273 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DFFAO00273 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.8■□□□□ 0.92
DFFAO00273 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.8■□□□□ 0.92
DFFAO00273 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.8■□□□□ 0.92
DFFAO00273 TSPY6P-201ENST00000448518 926 ntBASIC20.8■□□□□ 0.92
DFFAO00273 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.8■□□□□ 0.92
DFFAO00273 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.8■□□□□ 0.92
DFFAO00273 AL109923.1-201ENST00000618799 583 ntBASIC20.8■□□□□ 0.92
DFFAO00273 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
DFFAO00273 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DFFAO00273 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DFFAO00273 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms