Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 AC068473.5-201ENST00000616428 2072 ntBASIC23.85■■□□□ 1.41
TMEM88BA6NKF7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 AP005242.2-201ENST00000580065 1175 ntBASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM88BA6NKF7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 CLEC4GP1-201ENST00000596555 870 ntBASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 AC139887.4-201ENST00000607877 719 ntBASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 FAM87A-204ENST00000613235 858 ntBASIC23.83■■□□□ 1.41
TMEM88BA6NKF7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMEM88BA6NKF7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.83■■□□□ 1.4
TMEM88BA6NKF7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 FAM207BP-201ENST00000447172 505 ntBASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 FAM86EP-206ENST00000510506 987 ntBASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM88BA6NKF7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 IER3-202ENST00000376377 1350 ntBASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 HCG4P8-203ENST00000443049 980 ntBASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 AL121956.5-201ENST00000625261 221 ntBASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 FSCN1P1-201ENST00000568912 1481 ntBASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM88BA6NKF7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 AL031985.4-201ENST00000642138 673 ntBASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM88BA6NKF7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 TSPY5P-201ENST00000426936 936 ntBASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 AC092647.4-201ENST00000457211 535 ntBASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms