Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 AC007322.3-201ENST00000426526 701 ntBASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 CDV3P1-201ENST00000471403 739 ntBASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 FAM21FP-204ENST00000608637 956 ntBASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 AL162377.1-201ENST00000618844 1793 ntBASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV30A0A087WSZ9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV30A0A087WSZ9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 RBM17P2-201ENST00000616397 1405 ntBASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 AL158211.5-201ENST00000623583 2518 ntBASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 AC026471.1-201ENST00000564629 3026 ntBASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV30A0A087WSZ9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 AC091799.1-201ENST00000422823 811 ntBASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV30A0A087WSZ9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms