Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV25-1A0A075B6N4 AC006128.1-201ENST00000624704 1661 ntBASIC14.58□□□□□ -0.07
TRBV25-1A0A075B6N4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV25-1A0A075B6N4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV25-1A0A075B6N4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV25-1A0A075B6N4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TRBV25-1A0A075B6N4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 TSPY26P-201ENST00000476365 1326 ntBASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV25-1A0A075B6N4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 AC005082.1-201ENST00000413042 2259 ntBASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 PBX2P1-201ENST00000493219 1291 ntBASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV25-1A0A075B6N4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 AC005224.4-201ENST00000583262 1652 ntBASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 EDA-201ENST00000338901 1233 ntBASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 AC096631.2-201ENST00000436136 790 ntBASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 BX005040.4-201ENST00000637145 1518 ntBASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.56□□□□□ -0.08
TRBV25-1A0A075B6N4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV25-1A0A075B6N4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms