Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 FO393411.1-201ENST00000325612 420 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RNU1-8P-201ENST00000384328 165 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 MED28P1-201ENST00000399158 571 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 ATP5HP4-201ENST00000414313 475 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CARM1P1-201ENST00000426329 1185 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC018738.1-201ENST00000441378 210 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC107983.1-201ENST00000442562 210 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 LINC00578-204ENST00000446548 519 ntTSL 4 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 IGLVI-68-201ENST00000519525 345 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 DYM-207ENST00000578396 755 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC018737.1-201ENST00000603900 204 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 IST1-226ENST00000606369 3583 ntTSL 2 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC002540.1-201ENST00000625023 1349 ntBASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPIPA3F8WFD2 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 SMIM8-201ENST00000229570 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 AC063923.1-201ENST00000478982 1619 ntBASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 USP46-207ENST00000508499 1419 ntTSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NPIPA3F8WFD2 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 MIR425-201ENST00000362162 87 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC111200.2-201ENST00000418877 505 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 Z74696.1-201ENST00000428208 1123 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC025252.2-201ENST00000537470 502 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC048344.2-201ENST00000547280 147 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC087633.1-201ENST00000554649 715 ntTSL 3 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 BCAP31P2-201ENST00000563143 399 ntBASIC7.71□□□□□ -1.18
NPIPA3F8WFD2 BCAP31P1-201ENST00000565437 385 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms