RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 AEBP2Q6ZN18 517 aaPredicted RBP26.06■■□□□ 1.76
TRAV17-201ENST00000390445 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
TRAV17-201ENST00000390445 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
TRAV17-201ENST00000390445 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
TRAV17-201ENST00000390445 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
TRAV17-201ENST00000390445 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
TRAV17-201ENST00000390445 FOXD1Q16676 465 aa20.45■□□□□ 0.86
TRAV17-201ENST00000390445 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
TRAV17-201ENST00000390445 ADRA2BP18089 450 aa19.81■□□□□ 0.76
TRAV17-201ENST00000390445 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
TRAV17-201ENST00000390445 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
TRAV17-201ENST00000390445 MSH5O43196 834 aa18.71■□□□□ 0.59
TRAV17-201ENST00000390445 ABCC9O60706 1549 aa18.69■□□□□ 0.58
TRAV17-201ENST00000390445 POTEDQ86YR6 584 aa18.51■□□□□ 0.55
TRAV17-201ENST00000390445 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
TRAV17-201ENST00000390445 KCNA4P22459 653 aa18.16■□□□□ 0.5
TRAV17-201ENST00000390445 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
TRAV17-201ENST00000390445 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
TRAV17-201ENST00000390445 NCBP3Q53F19 620 aaKnown RBP17.84■□□□□ 0.45
TRAV17-201ENST00000390445 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
TRAV17-201ENST00000390445 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
TRAV17-201ENST00000390445 NACADO15069 1562 aa17.69■□□□□ 0.42
TRAV17-201ENST00000390445 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
TRAV17-201ENST00000390445 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
TRAV17-201ENST00000390445 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
TRAV17-201ENST00000390445 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
TRAV17-201ENST00000390445 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
TRAV17-201ENST00000390445 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
TRAV17-201ENST00000390445 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
TRAV17-201ENST00000390445 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAV17-201ENST00000390445 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
TRAV17-201ENST00000390445 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
TRAV17-201ENST00000390445 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
TRAV17-201ENST00000390445 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
TRAV17-201ENST00000390445 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
TRAV17-201ENST00000390445 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
TRAV17-201ENST00000390445 EHMT2Q96KQ7 1210 aa17■□□□□ 0.31
TRAV17-201ENST00000390445 SHROOM4Q9ULL8 1493 aa16.98■□□□□ 0.31
TRAV17-201ENST00000390445 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
TRAV17-201ENST00000390445 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
TRAV17-201ENST00000390445 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
TRAV17-201ENST00000390445 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
TRAV17-201ENST00000390445 ZBTB22O15209 634 aa16.75■□□□□ 0.27
TRAV17-201ENST00000390445 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
TRAV17-201ENST00000390445 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
TRAV17-201ENST00000390445 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
TRAV17-201ENST00000390445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRAV17-201ENST00000390445 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
TRAV17-201ENST00000390445 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
TRAV17-201ENST00000390445 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
TRAV17-201ENST00000390445 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
TRAV17-201ENST00000390445 U3KPZ7 1027 aaPredicted RBP16.28■□□□□ 0.2
TRAV17-201ENST00000390445 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
TRAV17-201ENST00000390445 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
TRAV17-201ENST00000390445 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
TRAV17-201ENST00000390445 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
TRAV17-201ENST00000390445 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
TRAV17-201ENST00000390445 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.17
TRAV17-201ENST00000390445 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
TRAV17-201ENST00000390445 NESP48681 1621 aa16.11■□□□□ 0.17
TRAV17-201ENST00000390445 RNF39Q9H2S5 420 aa16.1■□□□□ 0.17
TRAV17-201ENST00000390445 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
TRAV17-201ENST00000390445 WIZO95785 1651 aa16.05■□□□□ 0.16
TRAV17-201ENST00000390445 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.15
TRAV17-201ENST00000390445 CUX2O14529 1486 aa16.01■□□□□ 0.15
TRAV17-201ENST00000390445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
TRAV17-201ENST00000390445 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
TRAV17-201ENST00000390445 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
TRAV17-201ENST00000390445 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
TRAV17-201ENST00000390445 ATXN8OSP0DMR3 200 aa15.97■□□□□ 0.15
TRAV17-201ENST00000390445 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
TRAV17-201ENST00000390445 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
TRAV17-201ENST00000390445 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
TRAV17-201ENST00000390445 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
TRAV17-201ENST00000390445 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
TRAV17-201ENST00000390445 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
TRAV17-201ENST00000390445 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
TRAV17-201ENST00000390445 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
TRAV17-201ENST00000390445 APLP2Q06481 763 aa15.77■□□□□ 0.12
TRAV17-201ENST00000390445 TOP2AP11388 1531 aaKnown RBP15.76■□□□□ 0.11
TRAV17-201ENST00000390445 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
TRAV17-201ENST00000390445 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.1
TRAV17-201ENST00000390445 WDR62O43379 1518 aa15.7■□□□□ 0.1
TRAV17-201ENST00000390445 CEP164Q9UPV0 1460 aa15.66■□□□□ 0.1
TRAV17-201ENST00000390445 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
TRAV17-201ENST00000390445 CAPN15O75808 1086 aa15.65■□□□□ 0.1
TRAV17-201ENST00000390445 CFTRP13569 1480 aa15.65■□□□□ 0.1
TRAV17-201ENST00000390445 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
TRAV17-201ENST00000390445 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
TRAV17-201ENST00000390445 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
TRAV17-201ENST00000390445 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
TRAV17-201ENST00000390445 ABCB7O75027 752 aa15.42■□□□□ 0.06
TRAV17-201ENST00000390445 POLA2Q14181 598 aa15.41■□□□□ 0.06
TRAV17-201ENST00000390445 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
TRAV17-201ENST00000390445 DSG3P32926 999 aa15.38■□□□□ 0.05
TRAV17-201ENST00000390445 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
TRAV17-201ENST00000390445 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
TRAV17-201ENST00000390445 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
TRAV17-201ENST00000390445 IFT140Q96RY7 1462 aa15.32■□□□□ 0.04
TRAV17-201ENST00000390445 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms