Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EXOSC1Q9Y3B2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.15■□□□□ 0.5
EXOSC1Q9Y3B2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
EXOSC1Q9Y3B2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EXOSC1Q9Y3B2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 AL035685.1-201ENST00000636663 812 ntBASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EXOSC1Q9Y3B2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 MIR4767-201ENST00000582827 78 ntBASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 AC008175.2-201ENST00000612840 297 ntBASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EXOSC1Q9Y3B2 AP000974.1-201ENST00000623909 2387 ntBASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 TNXA-203ENST00000507684 2038 ntBASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.12■□□□□ 0.49
EXOSC1Q9Y3B2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 RARRES2P11-201ENST00000635158 484 ntBASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 AC005332.7-201ENST00000614046 2005 ntBASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EXOSC1Q9Y3B2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC1Q9Y3B2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.1■□□□□ 0.49
EXOSC1Q9Y3B2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC1Q9Y3B2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXOSC1Q9Y3B2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
EXOSC1Q9Y3B2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms