Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRCH1Q9Y2L9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRCH1Q9Y2L9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRCH1Q9Y2L9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRCH1Q9Y2L9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 AL032819.2-201ENST00000624543 2162 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 Z82202.1-201ENST00000623446 1880 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 MIR6724-1-201ENST00000616420 92 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 MIR6724-2-201ENST00000616483 92 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 MIR6724-4-201ENST00000617390 92 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 MIR6724-3-201ENST00000622482 92 ntBASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRCH1Q9Y2L9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRCH1Q9Y2L9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms