Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 AL162412.1-201ENST00000567129 965 ntBASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FNDC3AQ9Y2H6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 AC128676.1-201ENST00000454392 318 ntBASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FNDC3AQ9Y2H6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FNDC3AQ9Y2H6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 AC142381.4-202ENST00000563973 229 ntBASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.67■□□□□ 0.9
FNDC3AQ9Y2H6 PLK5-205ENST00000642079 1969 ntBASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 AC121338.2-201ENST00000622535 1744 ntBASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FNDC3AQ9Y2H6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.65■□□□□ 0.9
FNDC3AQ9Y2H6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FNDC3AQ9Y2H6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FNDC3AQ9Y2H6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms