Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SHANK2Q9UPX8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 AL121829.2-201ENST00000620908 328 ntBASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC30.46■■■□□ 2.47
SHANK2Q9UPX8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHANK2Q9UPX8 AL135905.2-201ENST00000584934 1404 ntBASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC30.45■■■□□ 2.46
SHANK2Q9UPX8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 AL049796.1-201ENST00000565336 1766 ntBASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 TSPY7P-201ENST00000431358 1114 ntBASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC30.44■■■□□ 2.46
SHANK2Q9UPX8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 AL121906.2-201ENST00000621597 723 ntBASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
SHANK2Q9UPX8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 AL024507.2-201ENST00000606070 2574 ntBASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.42■■■□□ 2.46
SHANK2Q9UPX8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SHANK2Q9UPX8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SHANK2Q9UPX8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms