Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGB4Q9UN71 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 AC079140.4-201ENST00000507448 529 ntBASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 TPRG1LP1-201ENST00000598702 760 ntBASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGB4Q9UN71 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 POU5F1P4-201ENST00000413175 1085 ntBASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGB4Q9UN71 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 SMG8-203ENST00000578922 2178 ntBASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 AC027702.1-201ENST00000563810 1770 ntBASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 IRS3P-201ENST00000223076 1006 ntBASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 AC061975.6-201ENST00000579045 1553 ntBASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGB4Q9UN71 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 KRT87P-202ENST00000534226 1464 ntBASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGB4Q9UN71 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB4Q9UN71 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB4Q9UN71 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
PCDHGB4Q9UN71 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGB4Q9UN71 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms