Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMCC3Q9ULS5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AC096631.2-201ENST00000436136 790 ntBASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AP001330.3-201ENST00000520123 633 ntBASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AC012414.1-201ENST00000556676 535 ntBASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 AC120498.10-201ENST00000621827 505 ntBASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.78■□□□□ 0.6
TMCC3Q9ULS5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 AC106739.1-201ENST00000617035 715 ntBASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
TMCC3Q9ULS5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TMCC3Q9ULS5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 AL355001.2-201ENST00000620617 1191 ntBASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 TCF3P1-201ENST00000423021 1937 ntBASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMCC3Q9ULS5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 AL354811.1-201ENST00000610286 706 ntBASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 RARRES2P11-201ENST00000635158 484 ntBASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMCC3Q9ULS5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms