Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC88CQ9P219 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC88CQ9P219 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC88CQ9P219 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 RPS2P52-201ENST00000469610 820 ntBASIC19.39■□□□□ 0.69
CCDC88CQ9P219 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 AL049796.1-201ENST00000565336 1766 ntBASIC19.39■□□□□ 0.69
CCDC88CQ9P219 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 AC098590.1-201ENST00000468126 897 ntBASIC19.39■□□□□ 0.69
CCDC88CQ9P219 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC88CQ9P219 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 FEM1AP1-201ENST00000431297 1995 ntBASIC19.38■□□□□ 0.69
CCDC88CQ9P219 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 AC093827.2-201ENST00000512654 315 ntBASIC19.38■□□□□ 0.69
CCDC88CQ9P219 AC008403.3-201ENST00000598924 454 ntBASIC19.38■□□□□ 0.69
CCDC88CQ9P219 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC88CQ9P219 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 AC100791.3-201ENST00000617619 330 ntBASIC19.37■□□□□ 0.69
CCDC88CQ9P219 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.37■□□□□ 0.69
CCDC88CQ9P219 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC88CQ9P219 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC88CQ9P219 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 AP003097.1-201ENST00000530657 1135 ntBASIC19.35■□□□□ 0.69
CCDC88CQ9P219 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 FAM21FP-204ENST00000608637 956 ntBASIC19.35■□□□□ 0.69
CCDC88CQ9P219 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC88CQ9P219 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC88CQ9P219 PCDHAC2-203ENST00000615316 3011 ntBASIC19.34■□□□□ 0.69
CCDC88CQ9P219 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC88CQ9P219 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC88CQ9P219 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC88CQ9P219 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC88CQ9P219 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms