Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 AP005212.1-201ENST00000581547 1997 ntBASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
C12orf4Q9NQ89 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf4Q9NQ89 AC055733.4-201ENST00000638462 1354 ntBASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 UNC93B3-201ENST00000308076 687 ntBASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
C12orf4Q9NQ89 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 AC121338.2-201ENST00000622535 1744 ntBASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
C12orf4Q9NQ89 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 AIRN-201ENST00000601203 4374 ntBASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C12orf4Q9NQ89 AC135279.3-201ENST00000610945 1311 ntBASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 BX323043.1-201ENST00000641006 1765 ntBASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 AC073314.1-201ENST00000568729 2216 ntBASIC17.51■□□□□ 0.39
C12orf4Q9NQ89 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms