Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 AC008175.2-201ENST00000612840 297 ntBASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 AC120498.10-201ENST00000621827 505 ntBASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMMDC1Q9NPL8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 ID1-201ENST00000376105 1233 ntBASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 RAP2CP1-201ENST00000605103 478 ntBASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMMDC1Q9NPL8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 AC006970.2-201ENST00000450065 779 ntBASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 AC231657.2-201ENST00000624556 255 ntBASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TIMMDC1Q9NPL8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.4■□□□□ 0.7
TIMMDC1Q9NPL8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms