Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 AC069236.1-201ENST00000604339 616 ntBASIC19.65■□□□□ 0.74
SOX17Q9H6I2 AC016405.3-201ENST00000607710 860 ntBASIC19.65■□□□□ 0.74
SOX17Q9H6I2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 AC073314.1-201ENST00000568729 2216 ntBASIC19.65■□□□□ 0.74
SOX17Q9H6I2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 AL049796.1-201ENST00000565336 1766 ntBASIC19.65■□□□□ 0.74
SOX17Q9H6I2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX17Q9H6I2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SOX17Q9H6I2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.64■□□□□ 0.74
SOX17Q9H6I2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.64■□□□□ 0.74
SOX17Q9H6I2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 AC093787.1-201ENST00000450396 207 ntBASIC19.64■□□□□ 0.73
SOX17Q9H6I2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 AC142086.2-201ENST00000569753 217 ntBASIC19.64■□□□□ 0.73
SOX17Q9H6I2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.64■□□□□ 0.73
SOX17Q9H6I2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 MKRN4P-201ENST00000444706 1521 ntBASIC19.63■□□□□ 0.73
SOX17Q9H6I2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 AL591742.1-201ENST00000604433 565 ntBASIC19.63■□□□□ 0.73
SOX17Q9H6I2 AC243732.1-201ENST00000612648 864 ntBASIC19.63■□□□□ 0.73
SOX17Q9H6I2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SOX17Q9H6I2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 AC245052.3-201ENST00000450182 901 ntBASIC19.62■□□□□ 0.73
SOX17Q9H6I2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 OR10C1-204ENST00000622521 1039 ntBASIC19.62■□□□□ 0.73
SOX17Q9H6I2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.62■□□□□ 0.73
SOX17Q9H6I2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SOX17Q9H6I2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms