Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDC42EP4Q9H3Q1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 AL691432.2-201ENST00000607222 2038 ntBASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDC42EP4Q9H3Q1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDC42EP4Q9H3Q1 KRT87P-202ENST00000534226 1464 ntBASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDC42EP4Q9H3Q1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 AC138907.5-202ENST00000569484 235 ntBASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 AP000974.1-201ENST00000623909 2387 ntBASIC20.63■□□□□ 0.89
CDC42EP4Q9H3Q1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 RASA4CP-201ENST00000424092 1398 ntBASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 DPP3P2-201ENST00000416030 1696 ntBASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 PBX2P1-201ENST00000493219 1291 ntBASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDC42EP4Q9H3Q1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms