Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR2J3Q9H1A7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR2J3Q9H1A7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 MIR638-201ENST00000385237 100 ntBASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR2J3Q9H1A7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR2J3Q9H1A7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.71■□□□□ 0.58
POLR2J3Q9H1A7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
POLR2J3Q9H1A7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.71■□□□□ 0.58
POLR2J3Q9H1A7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR2J3Q9H1A7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR2J3Q9H1A7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms