Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBE2OQ9C0C9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.45■■□□□ 1.18
UBE2OQ9C0C9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.45■■□□□ 1.18
UBE2OQ9C0C9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBE2OQ9C0C9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 UNC93B2-201ENST00000285383 730 ntBASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 MIR1238-201ENST00000408483 83 ntBASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 AC104076.2-201ENST00000448912 469 ntBASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 AC079598.2-202ENST00000546624 1451 ntBASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 AP000525.1-201ENST00000608286 694 ntBASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.44■■□□□ 1.18
UBE2OQ9C0C9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AC087633.2-202ENST00000565166 1439 ntBASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AL390719.1-204ENST00000412397 1219 ntBASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.43■■□□□ 1.18
UBE2OQ9C0C9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 C1orf229-201ENST00000623686 2258 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 AC073508.3-201ENST00000619697 1419 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 AL353807.1-201ENST00000427475 662 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 UPK3BP1-201ENST00000428678 509 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 NAPSB-206ENST00000562112 1266 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 AL031963.3-201ENST00000606441 850 ntBASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.42■■□□□ 1.18
UBE2OQ9C0C9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.41■■□□□ 1.18
UBE2OQ9C0C9 AC127496.7-201ENST00000625110 1798 ntBASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 AC233723.2-201ENST00000623798 2106 ntBASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.4■■□□□ 1.18
UBE2OQ9C0C9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 SLC25A3P1-201ENST00000443844 931 ntBASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 WWOX-216ENST00000569818 525 ntBASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.39■■□□□ 1.17
UBE2OQ9C0C9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms