Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 CCDC92B-201ENST00000575506 885 ntBASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AC243732.1-201ENST00000612648 864 ntBASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AC116562.4-201ENST00000641316 2276 ntBASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPPED1Q9BRF8 RBM17P2-201ENST00000616397 1405 ntBASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPPED1Q9BRF8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPPED1Q9BRF8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 AC105265.2-201ENST00000467189 838 ntBASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 KRT18P20-201ENST00000548986 1279 ntBASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CPPED1Q9BRF8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 BX119927.1-201ENST00000636596 1552 ntBASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPPED1Q9BRF8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 AL691432.2-201ENST00000607222 2038 ntBASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPPED1Q9BRF8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms