Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 CYP2T3P-201ENST00000601990 817 ntBASIC16.24■□□□□ 0.19
RNF5Q99942 AC005181.1-201ENST00000604782 1256 ntBASIC16.24■□□□□ 0.19
RNF5Q99942 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RNF5Q99942 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF5Q99942 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF5Q99942 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF5Q99942 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF5Q99942 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF5Q99942 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 AC092437.1-201ENST00000624794 1048 ntBASIC16.23■□□□□ 0.19
RNF5Q99942 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF5Q99942 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF5Q99942 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNF5Q99942 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RNF5Q99942 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF5Q99942 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF5Q99942 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF5Q99942 AL589743.5-201ENST00000616611 1050 ntBASIC16.22■□□□□ 0.19
RNF5Q99942 AC105020.6-201ENST00000621523 1217 ntBASIC16.22■□□□□ 0.19
RNF5Q99942 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF5Q99942 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF5Q99942 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 AC010980.2-201ENST00000587099 1412 ntBASIC16.21■□□□□ 0.19
RNF5Q99942 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 AC026185.1-201ENST00000445748 174 ntBASIC16.21■□□□□ 0.19
RNF5Q99942 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF5Q99942 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF5Q99942 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.21■□□□□ 0.19
RNF5Q99942 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 AC073111.5-205ENST00000641717 521 ntBASIC16.21■□□□□ 0.19
RNF5Q99942 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF5Q99942 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF5Q99942 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF5Q99942 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF5Q99942 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RNF5Q99942 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.21■□□□□ 0.18
RNF5Q99942 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RNF5Q99942 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.21■□□□□ 0.18
RNF5Q99942 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF5Q99942 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF5Q99942 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF5Q99942 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF5Q99942 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms