Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC092720.2-201ENST00000602388 1665 ntBASIC19.78■□□□□ 0.76
PKP4Q99569 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PKP4Q99569 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.78■□□□□ 0.76
PKP4Q99569 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PKP4Q99569 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.78■□□□□ 0.76
PKP4Q99569 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.78■□□□□ 0.76
PKP4Q99569 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PKP4Q99569 AL121832.2-201ENST00000610979 668 ntBASIC19.78■□□□□ 0.76
PKP4Q99569 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.78■□□□□ 0.76
PKP4Q99569 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PKP4Q99569 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.78■□□□□ 0.76
PKP4Q99569 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PKP4Q99569 GABARAPL3-202ENST00000624044 1851 ntBASIC19.77■□□□□ 0.76
PKP4Q99569 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP4Q99569 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP4Q99569 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 MKRN4P-201ENST00000444706 1521 ntBASIC19.77■□□□□ 0.76
PKP4Q99569 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PKP4Q99569 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 NCF1B-203ENST00000435988 1254 ntBASIC19.77■□□□□ 0.76
PKP4Q99569 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.77■□□□□ 0.76
PKP4Q99569 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.77■□□□□ 0.76
PKP4Q99569 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.77■□□□□ 0.76
PKP4Q99569 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.77■□□□□ 0.76
PKP4Q99569 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.77■□□□□ 0.76
PKP4Q99569 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PKP4Q99569 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PKP4Q99569 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP4Q99569 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PKP4Q99569 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PKP4Q99569 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP4Q99569 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
PKP4Q99569 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP4Q99569 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.76■□□□□ 0.75
PKP4Q99569 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP4Q99569 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP4Q99569 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.76■□□□□ 0.75
PKP4Q99569 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 KRT17P1-201ENST00000399211 1546 ntBASIC19.76■□□□□ 0.75
PKP4Q99569 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PKP4Q99569 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
PKP4Q99569 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PKP4Q99569 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.75■□□□□ 0.75
PKP4Q99569 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.75■□□□□ 0.75
PKP4Q99569 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.75■□□□□ 0.75
PKP4Q99569 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.75■□□□□ 0.75
PKP4Q99569 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PKP4Q99569 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.74■□□□□ 0.75
PKP4Q99569 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.74■□□□□ 0.75
PKP4Q99569 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKP4Q99569 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PKP4Q99569 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms