Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC17Q96LX7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 LINC00565-201ENST00000562710 2331 ntBASIC23.8■■□□□ 1.4
CCDC17Q96LX7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CCDC17Q96LX7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 PLK5-205ENST00000642079 1969 ntBASIC23.79■■□□□ 1.4
CCDC17Q96LX7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC17Q96LX7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC17Q96LX7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 MTDHP1-201ENST00000605323 784 ntBASIC23.77■■□□□ 1.4
CCDC17Q96LX7 FAM197Y4-202ENST00000622692 608 ntBASIC23.77■■□□□ 1.4
CCDC17Q96LX7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC17Q96LX7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CCDC17Q96LX7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC17Q96LX7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms