Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PHF3Q92576 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF3Q92576 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF3Q92576 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 AL589743.5-201ENST00000616611 1050 ntBASIC18.34■□□□□ 0.53
PHF3Q92576 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.34■□□□□ 0.53
PHF3Q92576 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.34■□□□□ 0.53
PHF3Q92576 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF3Q92576 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF3Q92576 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHF3Q92576 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF3Q92576 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.33■□□□□ 0.53
PHF3Q92576 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.53
PHF3Q92576 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.33■□□□□ 0.53
PHF3Q92576 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.33■□□□□ 0.53
PHF3Q92576 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHF3Q92576 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.33■□□□□ 0.53
PHF3Q92576 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.33■□□□□ 0.53
PHF3Q92576 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHF3Q92576 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHF3Q92576 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PHF3Q92576 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHF3Q92576 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 POM121L13P-201ENST00000422362 380 ntBASIC18.33■□□□□ 0.52
PHF3Q92576 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.33■□□□□ 0.52
PHF3Q92576 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 AL356652.1-201ENST00000615962 565 ntBASIC18.33■□□□□ 0.52
PHF3Q92576 FAM197Y4-202ENST00000622692 608 ntBASIC18.33■□□□□ 0.52
PHF3Q92576 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.33■□□□□ 0.52
PHF3Q92576 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PHF3Q92576 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHF3Q92576 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 AC092368.3-202ENST00000574180 1591 ntBASIC18.32■□□□□ 0.52
PHF3Q92576 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.32■□□□□ 0.52
PHF3Q92576 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.32■□□□□ 0.52
PHF3Q92576 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 AC006128.1-201ENST00000624704 1661 ntBASIC18.32■□□□□ 0.52
PHF3Q92576 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PHF3Q92576 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PHF3Q92576 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.32■□□□□ 0.52
PHF3Q92576 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PHF3Q92576 AL359736.2-201ENST00000621992 437 ntBASIC18.32■□□□□ 0.52
PHF3Q92576 AC073648.6-201ENST00000641589 218 ntBASIC18.32■□□□□ 0.52
PHF3Q92576 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF3Q92576 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF3Q92576 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PHF3Q92576 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.31■□□□□ 0.52
PHF3Q92576 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHF3Q92576 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF3Q92576 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF3Q92576 KRT18P68-201ENST00000392293 1000 ntBASIC18.31■□□□□ 0.52
PHF3Q92576 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF3Q92576 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.31■□□□□ 0.52
PHF3Q92576 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PHF3Q92576 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.31■□□□□ 0.52
PHF3Q92576 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PHF3Q92576 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF3Q92576 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.3■□□□□ 0.52
PHF3Q92576 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF3Q92576 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PHF3Q92576 AL049796.1-201ENST00000565336 1766 ntBASIC18.3■□□□□ 0.52
PHF3Q92576 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.3■□□□□ 0.52
PHF3Q92576 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.3■□□□□ 0.52
PHF3Q92576 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF3Q92576 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms