Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRPM4Q8TD43 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRPM4Q8TD43 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 NTF6B-201ENST00000591913 560 ntBASIC24.26■■□□□ 1.47
TRPM4Q8TD43 AC010947.1-201ENST00000623454 693 ntBASIC24.26■■□□□ 1.47
TRPM4Q8TD43 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRPM4Q8TD43 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.25■■□□□ 1.47
TRPM4Q8TD43 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TRPM4Q8TD43 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 AL137013.1-201ENST00000432946 1228 ntBASIC24.23■■□□□ 1.47
TRPM4Q8TD43 DUX4L26-201ENST00000489078 1255 ntBASIC24.23■■□□□ 1.47
TRPM4Q8TD43 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 NAPSB-206ENST00000562112 1266 ntBASIC24.23■■□□□ 1.47
TRPM4Q8TD43 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRPM4Q8TD43 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 AC104076.2-201ENST00000448912 469 ntBASIC24.22■■□□□ 1.47
TRPM4Q8TD43 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TRPM4Q8TD43 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 SLC25A3P1-201ENST00000443844 931 ntBASIC24.21■■□□□ 1.47
TRPM4Q8TD43 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 AP002982.1-201ENST00000492365 877 ntBASIC24.21■■□□□ 1.47
TRPM4Q8TD43 FITM1-202ENST00000559294 800 ntBASIC24.21■■□□□ 1.47
TRPM4Q8TD43 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.21■■□□□ 1.47
TRPM4Q8TD43 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms