Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 AC007322.3-201ENST00000426526 701 ntBASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCC2Q8TAQ2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 AC092720.2-201ENST00000602388 1665 ntBASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 TSPY6P-201ENST00000448518 926 ntBASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.81■■□□□ 1.4
SMARCC2Q8TAQ2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 SLC29A4P1-201ENST00000398760 971 ntBASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 AL355802.2-201ENST00000402069 882 ntBASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 AL162412.1-201ENST00000567129 965 ntBASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 OR10C1-204ENST00000622521 1039 ntBASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCC2Q8TAQ2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 AC016405.3-201ENST00000607710 860 ntBASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMARCC2Q8TAQ2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMARCC2Q8TAQ2 KRT8P36-201ENST00000489121 1440 ntBASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 AC099778.1-201ENST00000568593 1911 ntBASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 GUSBP6-202ENST00000438529 1198 ntBASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.77■■□□□ 1.4
SMARCC2Q8TAQ2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SMARCC2Q8TAQ2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SMARCC2Q8TAQ2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SMARCC2Q8TAQ2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms