Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC11.16□□□□□ -0.62
SPTSSBQ8NFR3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 NORAD-201ENST00000565493 5339 ntBASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SPTSSBQ8NFR3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.15□□□□□ -0.63
SPTSSBQ8NFR3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SPTSSBQ8NFR3 DUX4L28-201ENST00000623687 678 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms