Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX5Q8N196 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.86■□□□□ 0.93
SIX5Q8N196 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX5Q8N196 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIX5Q8N196 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SIX5Q8N196 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX5Q8N196 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIX5Q8N196 AC005521.1-201ENST00000393351 872 ntBASIC20.85■□□□□ 0.93
SIX5Q8N196 PGM5P4-201ENST00000421970 445 ntBASIC20.85■□□□□ 0.93
SIX5Q8N196 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.85■□□□□ 0.93
SIX5Q8N196 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.85■□□□□ 0.93
SIX5Q8N196 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX5Q8N196 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX5Q8N196 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.85■□□□□ 0.93
SIX5Q8N196 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.84■□□□□ 0.93
SIX5Q8N196 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX5Q8N196 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.84■□□□□ 0.93
SIX5Q8N196 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SIX5Q8N196 FAM197Y1-201ENST00000421178 764 ntBASIC20.84■□□□□ 0.93
SIX5Q8N196 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.84■□□□□ 0.93
SIX5Q8N196 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.84■□□□□ 0.93
SIX5Q8N196 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIX5Q8N196 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
SIX5Q8N196 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SIX5Q8N196 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SIX5Q8N196 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
SIX5Q8N196 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
SIX5Q8N196 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX5Q8N196 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SIX5Q8N196 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX5Q8N196 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.83■□□□□ 0.93
SIX5Q8N196 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIX5Q8N196 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.83■□□□□ 0.93
SIX5Q8N196 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SIX5Q8N196 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.83■□□□□ 0.93
SIX5Q8N196 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX5Q8N196 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SIX5Q8N196 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.83■□□□□ 0.92
SIX5Q8N196 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.82■□□□□ 0.92
SIX5Q8N196 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.82■□□□□ 0.92
SIX5Q8N196 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
SIX5Q8N196 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SIX5Q8N196 AL353807.1-201ENST00000427475 662 ntBASIC20.82■□□□□ 0.92
SIX5Q8N196 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.82■□□□□ 0.92
SIX5Q8N196 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.82■□□□□ 0.92
SIX5Q8N196 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIX5Q8N196 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SIX5Q8N196 KRT8P9-201ENST00000558927 1449 ntBASIC20.81■□□□□ 0.92
SIX5Q8N196 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 KRT18P57-201ENST00000443599 1254 ntBASIC20.81■□□□□ 0.92
SIX5Q8N196 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SIX5Q8N196 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX5Q8N196 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX5Q8N196 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.81■□□□□ 0.92
SIX5Q8N196 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.81■□□□□ 0.92
SIX5Q8N196 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SIX5Q8N196 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SIX5Q8N196 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX5Q8N196 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SIX5Q8N196 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SIX5Q8N196 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SIX5Q8N196 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.8■□□□□ 0.92
SIX5Q8N196 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SIX5Q8N196 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SIX5Q8N196 RBM17P1-201ENST00000453646 1190 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms