Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25■■□□□ 1.59
SLX4Q8IY92 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25■■□□□ 1.59
SLX4Q8IY92 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLX4Q8IY92 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25■■□□□ 1.59
SLX4Q8IY92 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25■■□□□ 1.59
SLX4Q8IY92 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SLX4Q8IY92 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLX4Q8IY92 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SLX4Q8IY92 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLX4Q8IY92 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SLX4Q8IY92 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SLX4Q8IY92 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25■■□□□ 1.59
SLX4Q8IY92 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SLX4Q8IY92 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25■■□□□ 1.59
SLX4Q8IY92 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.99■■□□□ 1.59
SLX4Q8IY92 C9orf163-202ENST00000624034 2573 ntBASIC24.99■■□□□ 1.59
SLX4Q8IY92 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SLX4Q8IY92 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SLX4Q8IY92 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.99■■□□□ 1.59
SLX4Q8IY92 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLX4Q8IY92 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SLX4Q8IY92 CYP2D8P-201ENST00000433633 1490 ntBASIC24.99■■□□□ 1.59
SLX4Q8IY92 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.99■■□□□ 1.59
SLX4Q8IY92 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLX4Q8IY92 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLX4Q8IY92 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLX4Q8IY92 AC073195.1-201ENST00000607241 877 ntBASIC24.98■■□□□ 1.59
SLX4Q8IY92 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SLX4Q8IY92 TERF1P1-201ENST00000311003 1181 ntBASIC24.98■■□□□ 1.59
SLX4Q8IY92 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLX4Q8IY92 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.98■■□□□ 1.59
SLX4Q8IY92 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SLX4Q8IY92 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.97■■□□□ 1.59
SLX4Q8IY92 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.97■■□□□ 1.59
SLX4Q8IY92 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC24.97■■□□□ 1.59
SLX4Q8IY92 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SLX4Q8IY92 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.97■■□□□ 1.59
SLX4Q8IY92 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SLX4Q8IY92 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SLX4Q8IY92 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SLX4Q8IY92 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 AC073508.3-201ENST00000619697 1419 ntBASIC24.96■■□□□ 1.59
SLX4Q8IY92 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLX4Q8IY92 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SLX4Q8IY92 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.96■■□□□ 1.59
SLX4Q8IY92 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SLX4Q8IY92 LINC01568-207ENST00000641790 1380 ntBASIC24.95■■□□□ 1.59
SLX4Q8IY92 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SLX4Q8IY92 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
SLX4Q8IY92 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SLX4Q8IY92 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SLX4Q8IY92 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.95■■□□□ 1.58
SLX4Q8IY92 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SLX4Q8IY92 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.95■■□□□ 1.58
SLX4Q8IY92 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SLX4Q8IY92 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLX4Q8IY92 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SLX4Q8IY92 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
SLX4Q8IY92 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 MIR1238-201ENST00000408483 83 ntBASIC24.94■■□□□ 1.58
SLX4Q8IY92 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 SLC25A3P1-201ENST00000443844 931 ntBASIC24.94■■□□□ 1.58
SLX4Q8IY92 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 AC116562.2-201ENST00000507042 360 ntBASIC24.94■■□□□ 1.58
SLX4Q8IY92 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 AC010947.1-201ENST00000623454 693 ntBASIC24.94■■□□□ 1.58
SLX4Q8IY92 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SLX4Q8IY92 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.94■■□□□ 1.58
SLX4Q8IY92 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms