Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HIST2H2BCQ6DN03 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 C2orf69P3-201ENST00000565542 1120 ntBASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 FAM87A-204ENST00000613235 858 ntBASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 AC023511.2-201ENST00000618803 211 ntBASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HIST2H2BCQ6DN03 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 RNF152P1-201ENST00000397754 604 ntBASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST2H2BCQ6DN03 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 AC139530.1-201ENST00000575312 1977 ntBASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 AC092647.4-201ENST00000457211 535 ntBASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.52■□□□□ 0.4
HIST2H2BCQ6DN03 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST2H2BCQ6DN03 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HIST2H2BCQ6DN03 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST2H2BCQ6DN03 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms