Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 AL049637.2-201ENST00000641778 930 ntBASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRTCAP3Q53RY4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 AC023632.3-201ENST00000521633 145 ntBASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 RARRES2P10-201ENST00000564312 460 ntBASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRTCAP3Q53RY4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRTCAP3Q53RY4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 MIR4785-201ENST00000585005 73 ntBASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 AL121829.2-201ENST00000620908 328 ntBASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRTCAP3Q53RY4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
KRTCAP3Q53RY4 AC244015.2-201ENST00000616358 1861 ntBASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRTCAP3Q53RY4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 AC027702.1-201ENST00000563810 1770 ntBASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms