Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 AGA2YGL032C 264 nt1.98□□□□□ -2.09
DNL4Q08387 YHR125WYHR125W 306 nt1.98□□□□□ -2.09
DNL4Q08387 RPC10YHR143W-A 213 nt1.98□□□□□ -2.09
DNL4Q08387 CRG1YHR209W 876 nt1.98□□□□□ -2.09
DNL4Q08387 TPM2YIL138C 486 nt1.98□□□□□ -2.09
DNL4Q08387 YJR140W-AYJR140W-A 150 nt1.98□□□□□ -2.09
DNL4Q08387 YKL111CYKL111C 336 nt1.98□□□□□ -2.09
DNL4Q08387 CMS1YLR003C 876 nt1.98□□□□□ -2.09
DNL4Q08387 SEN15YMR059W 387 nt1.98□□□□□ -2.09
DNL4Q08387 RPB11YOL005C 363 nt1.98□□□□□ -2.09
DNL4Q08387 UBP11YKR098C 2154 nt1.98□□□□□ -2.09
DNL4Q08387 MET18YIL128W 3099 nt1.97□□□□□ -2.09
DNL4Q08387 YBR012W-AYBR012W-A 1323 nt1.97□□□□□ -2.09
DNL4Q08387 YOR142W-AYOR142W-A 1323 nt1.97□□□□□ -2.09
DNL4Q08387 YPR158W-AYPR158W-A 1323 nt1.97□□□□□ -2.09
DNL4Q08387 MDM32YOR147W 1869 nt1.97□□□□□ -2.09
DNL4Q08387 FMP16YDR070C 282 nt1.97□□□□□ -2.09
DNL4Q08387 YHR139C-AYHR139C-A 312 nt1.97□□□□□ -2.09
DNL4Q08387 NBL1YHR199C-A 222 nt1.97□□□□□ -2.09
DNL4Q08387 TIM8YJR135W-A 264 nt1.97□□□□□ -2.09
DNL4Q08387 RAM2YKL019W 951 nt1.97□□□□□ -2.09
DNL4Q08387 YLR458WYLR458W 381 nt1.97□□□□□ -2.09
DNL4Q08387 YMR272W-BYMR272W-B 108 nt1.97□□□□□ -2.09
DNL4Q08387 YOR392WYOR392W 444 nt1.97□□□□□ -2.09
DNL4Q08387 TSC3YBR058C-A 243 nt1.97□□□□□ -2.09
DNL4Q08387 YOR093CYOR093C 4947 nt1.97□□□□□ -2.09
DNL4Q08387 SET2YJL168C 2202 nt1.97□□□□□ -2.09
DNL4Q08387 YDR118W-AYDR118W-A 117 nt1.96□□□□□ -2.1
DNL4Q08387 YER135CYER135C 393 nt1.96□□□□□ -2.1
DNL4Q08387 RPL40AYIL148W 387 nt1.96□□□□□ -2.1
DNL4Q08387 YOR248WYOR248W 303 nt1.96□□□□□ -2.1
DNL4Q08387 YBR032WYBR032W 303 nt1.96□□□□□ -2.1
DNL4Q08387 LEE1YPL054W 906 nt1.96□□□□□ -2.1
DNL4Q08387 USO1YDL058W 5373 nt1.96□□□□□ -2.1
DNL4Q08387 VPH1YOR270C 2523 nt1.95□□□□□ -2.1
DNL4Q08387 RUD3YOR216C 1455 nt1.95□□□□□ -2.1
DNL4Q08387 PTC5YOR090C 1719 nt1.95□□□□□ -2.1
DNL4Q08387 YEL018C-AYEL018C-A 534 nt1.95□□□□□ -2.1
DNL4Q08387 YHR210CYHR210C 1026 nt1.95□□□□□ -2.1
DNL4Q08387 TEN1YLR010C 483 nt1.95□□□□□ -2.1
DNL4Q08387 REV1YOR346W 2958 nt1.95□□□□□ -2.1
DNL4Q08387 YPR170W-AYPR170W-A 186 nt1.95□□□□□ -2.1
DNL4Q08387 UBR2YLR024C 5619 nt1.95□□□□□ -2.1
DNL4Q08387 DFG16YOR030W 1860 nt1.94□□□□□ -2.1
DNL4Q08387 YHR175W-AYHR175W-A 150 nt1.94□□□□□ -2.1
DNL4Q08387 YLR334CYLR334C 381 nt1.94□□□□□ -2.1
DNL4Q08387 YOR293C-AYOR293C-A 150 nt1.94□□□□□ -2.1
DNL4Q08387 YPL261CYPL261C 309 nt1.94□□□□□ -2.1
DNL4Q08387 MGR1YCL044C 1254 nt1.94□□□□□ -2.1
DNL4Q08387 NAN1YPL126W 2691 nt1.94□□□□□ -2.1
DNL4Q08387 RTT101YJL047C 2529 nt1.94□□□□□ -2.1
DNL4Q08387 RTT107YHR154W 3213 nt1.94□□□□□ -2.1
DNL4Q08387 TUS1YLR425W 3924 nt1.94□□□□□ -2.1
DNL4Q08387 NIC96YFR002W 2520 nt1.93□□□□□ -2.1
DNL4Q08387 YDR194W-AYDR194W-A 153 nt1.93□□□□□ -2.1
DNL4Q08387 YDR269CYDR269C 324 nt1.93□□□□□ -2.1
DNL4Q08387 YER079WYER079W 633 nt1.93□□□□□ -2.1
DNL4Q08387 IES5YER092W 378 nt1.93□□□□□ -2.1
DNL4Q08387 IRC19YLL033W 693 nt1.93□□□□□ -2.1
DNL4Q08387 YLR031WYLR031W 561 nt1.93□□□□□ -2.1
DNL4Q08387 YML084WYML084W 309 nt1.93□□□□□ -2.1
DNL4Q08387 YMR001C-AYMR001C-A 231 nt1.93□□□□□ -2.1
DNL4Q08387 LSM7YNL147W 348 nt1.93□□□□□ -2.1
DNL4Q08387 IPT1YDR072C 1584 nt1.93□□□□□ -2.1
DNL4Q08387 BRO1YPL084W 2535 nt1.92□□□□□ -2.1
DNL4Q08387 YER087C-AYER087C-A 552 nt1.92□□□□□ -2.1
DNL4Q08387 YGR025WYGR025W 303 nt1.92□□□□□ -2.1
DNL4Q08387 tR(ACG)Q2tR(ACG)Q2 74 nt1.92□□□□□ -2.1
DNL4Q08387 TMA7YLR262C-A 195 nt1.92□□□□□ -2.1
DNL4Q08387 YOL159CYOL159C 516 nt1.92□□□□□ -2.1
DNL4Q08387 SLM6YBR266C 453 nt1.92□□□□□ -2.1
DNL4Q08387 CDC53YDL132W 2448 nt1.92□□□□□ -2.1
DNL4Q08387 LHS1YKL073W 2646 nt1.92□□□□□ -2.1
DNL4Q08387 TRL1YJL087C 2484 nt1.92□□□□□ -2.1
DNL4Q08387 UTP21YLR409C 2820 nt1.91□□□□□ -2.1
DNL4Q08387 SWF1YDR126W 1011 nt1.91□□□□□ -2.1
DNL4Q08387 GIM4YEL003W 336 nt1.91□□□□□ -2.1
DNL4Q08387 YER068C-AYER068C-A 432 nt1.91□□□□□ -2.1
DNL4Q08387 YER188C-AYER188C-A 300 nt1.91□□□□□ -2.1
DNL4Q08387 YGL024WYGL024W 336 nt1.91□□□□□ -2.1
DNL4Q08387 Q0142Q0142 177 nt1.91□□□□□ -2.1
DNL4Q08387 tT(UGU)HtT(UGU)H 72 nt1.91□□□□□ -2.1
DNL4Q08387 MSL1YIR009W 336 nt1.91□□□□□ -2.1
DNL4Q08387 VPS8YAL002W 3825 nt1.91□□□□□ -2.1
DNL4Q08387 YMR247W-AYMR247W-A 144 nt1.91□□□□□ -2.1
DNL4Q08387 YOR105WYOR105W 327 nt1.91□□□□□ -2.1
DNL4Q08387 snR13snR13 124 nt1.91□□□□□ -2.1
DNL4Q08387 YPR012WYPR012W 255 nt1.91□□□□□ -2.1
DNL4Q08387 YPR039WYPR039W 336 nt1.91□□□□□ -2.1
DNL4Q08387 SFB2YNL049C 2631 nt1.91□□□□□ -2.1
DNL4Q08387 NCL1YBL024W 2055 nt1.9□□□□□ -2.1
DNL4Q08387 NUP82YJL061W 2142 nt1.9□□□□□ -2.1
DNL4Q08387 HSH155YMR288W 2916 nt1.9□□□□□ -2.11
DNL4Q08387 CDC50YCR094W 1176 nt1.9□□□□□ -2.11
DNL4Q08387 YDL025W-AYDL025W-A 105 nt1.9□□□□□ -2.11
DNL4Q08387 YGL014C-AYGL014C-A 162 nt1.9□□□□□ -2.11
DNL4Q08387 NCE101YJL205C 162 nt1.9□□□□□ -2.11
DNL4Q08387 SNC1YAL030W 354 nt1.9□□□□□ -2.11
DNL4Q08387 COX7YMR256C 183 nt1.9□□□□□ -2.11
DNL4Q08387 YOR333CYOR333C 417 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms