Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CXCR4P61073 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CXCR4P61073 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.49■□□□□ 0.55
CXCR4P61073 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CXCR4P61073 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 UNC93B3-201ENST00000308076 687 ntBASIC18.49■□□□□ 0.55
CXCR4P61073 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.49■□□□□ 0.55
CXCR4P61073 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.49■□□□□ 0.55
CXCR4P61073 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.49■□□□□ 0.55
CXCR4P61073 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CXCR4P61073 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CXCR4P61073 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.49■□□□□ 0.55
CXCR4P61073 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CXCR4P61073 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.49■□□□□ 0.55
CXCR4P61073 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
CXCR4P61073 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.48■□□□□ 0.55
CXCR4P61073 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 IGHV3-19-201ENST00000521488 291 ntBASIC18.48■□□□□ 0.55
CXCR4P61073 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.48■□□□□ 0.55
CXCR4P61073 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CXCR4P61073 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
CXCR4P61073 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.48■□□□□ 0.55
CXCR4P61073 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CXCR4P61073 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.48■□□□□ 0.55
CXCR4P61073 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CXCR4P61073 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.47■□□□□ 0.55
CXCR4P61073 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CXCR4P61073 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.47■□□□□ 0.55
CXCR4P61073 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.47■□□□□ 0.55
CXCR4P61073 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.47■□□□□ 0.55
CXCR4P61073 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CXCR4P61073 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CXCR4P61073 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CXCR4P61073 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CXCR4P61073 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.46■□□□□ 0.55
CXCR4P61073 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CXCR4P61073 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.46■□□□□ 0.55
CXCR4P61073 AC024257.2-201ENST00000549699 147 ntBASIC18.46■□□□□ 0.55
CXCR4P61073 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.46■□□□□ 0.55
CXCR4P61073 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.46■□□□□ 0.55
CXCR4P61073 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CXCR4P61073 Z82202.1-201ENST00000623446 1880 ntBASIC18.46■□□□□ 0.54
CXCR4P61073 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CXCR4P61073 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
CXCR4P61073 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CXCR4P61073 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.45■□□□□ 0.54
CXCR4P61073 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CXCR4P61073 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.45■□□□□ 0.54
CXCR4P61073 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CXCR4P61073 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.45■□□□□ 0.54
CXCR4P61073 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms