Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
ZNF140P52738 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF140P52738 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ZNF140P52738 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF140P52738 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF140P52738 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.27■□□□□ 0.84
ZNF140P52738 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF140P52738 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
ZNF140P52738 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF140P52738 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF140P52738 KRT17P1-201ENST00000399211 1546 ntBASIC20.27■□□□□ 0.83
ZNF140P52738 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
ZNF140P52738 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF140P52738 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNF140P52738 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNF140P52738 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.26■□□□□ 0.83
ZNF140P52738 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF140P52738 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.26■□□□□ 0.83
ZNF140P52738 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF140P52738 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNF140P52738 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ZNF140P52738 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ZNF140P52738 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF140P52738 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.25■□□□□ 0.83
ZNF140P52738 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 MKRN4P-201ENST00000444706 1521 ntBASIC20.25■□□□□ 0.83
ZNF140P52738 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF140P52738 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF140P52738 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ZNF140P52738 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF140P52738 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 DPP3P2-201ENST00000416030 1696 ntBASIC20.24■□□□□ 0.83
ZNF140P52738 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF140P52738 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ZNF140P52738 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.24■□□□□ 0.83
ZNF140P52738 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF140P52738 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 AL121832.2-201ENST00000610979 668 ntBASIC20.24■□□□□ 0.83
ZNF140P52738 AL589743.5-201ENST00000616611 1050 ntBASIC20.24■□□□□ 0.83
ZNF140P52738 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ZNF140P52738 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF140P52738 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF140P52738 SMG8-203ENST00000578922 2178 ntBASIC20.24■□□□□ 0.83
ZNF140P52738 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF140P52738 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF140P52738 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF140P52738 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 NCF1B-203ENST00000435988 1254 ntBASIC20.23■□□□□ 0.83
ZNF140P52738 GUSBP6-202ENST00000438529 1198 ntBASIC20.23■□□□□ 0.83
ZNF140P52738 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF140P52738 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF140P52738 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms