Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.64■□□□□ 0.73
RAB28P51157 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.64■□□□□ 0.73
RAB28P51157 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.64■□□□□ 0.73
RAB28P51157 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.64■□□□□ 0.73
RAB28P51157 AC083880.1-201ENST00000608266 535 ntBASIC19.64■□□□□ 0.73
RAB28P51157 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB28P51157 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB28P51157 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB28P51157 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB28P51157 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB28P51157 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB28P51157 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB28P51157 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB28P51157 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB28P51157 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RAB28P51157 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB28P51157 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.62■□□□□ 0.73
RAB28P51157 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RAB28P51157 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB28P51157 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB28P51157 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB28P51157 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB28P51157 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB28P51157 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB28P51157 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB28P51157 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB28P51157 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB28P51157 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB28P51157 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB28P51157 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB28P51157 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB28P51157 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB28P51157 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB28P51157 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB28P51157 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB28P51157 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB28P51157 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB28P51157 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 AC092720.2-201ENST00000602388 1665 ntBASIC19.59■□□□□ 0.73
RAB28P51157 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB28P51157 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB28P51157 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
RAB28P51157 KRT18P6-201ENST00000555540 1265 ntBASIC19.59■□□□□ 0.73
RAB28P51157 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB28P51157 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB28P51157 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB28P51157 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
RAB28P51157 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAB28P51157 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms