Protein–RNA interactions for Protein: P36130

CAF4, CCR4-associated factor 4, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF4P36130 15S_rRNA15S_rRNA 1649 nt1.07□□□□□ -2.24
CAF4P36130 YDR194W-AYDR194W-A 153 nt1.07□□□□□ -2.24
CAF4P36130 HTB1YDR224C 396 nt1.07□□□□□ -2.24
CAF4P36130 RSM28YDR494W 1086 nt1.07□□□□□ -2.24
CAF4P36130 ABM1YJR108W 372 nt1.07□□□□□ -2.24
CAF4P36130 LCL2YLR104W 396 nt1.07□□□□□ -2.24
CAF4P36130 CTK3YML112W 891 nt1.07□□□□□ -2.24
CAF4P36130 YPL039WYPL039W 951 nt1.07□□□□□ -2.24
CAF4P36130 AZF1YOR113W 2745 nt1.06□□□□□ -2.24
CAF4P36130 BNA7YDR428C 786 nt1.06□□□□□ -2.24
CAF4P36130 YDR461C-AYDR461C-A 243 nt1.06□□□□□ -2.24
CAF4P36130 FSH1YHR049W 732 nt1.06□□□□□ -2.24
CAF4P36130 BET4YJL031C 984 nt1.06□□□□□ -2.24
CAF4P36130 YPL119C-AYPL119C-A 264 nt1.06□□□□□ -2.24
CAF4P36130 snR83snR83 306 nt1.05□□□□□ -2.24
CAF4P36130 EMC5YIL027C 426 nt1.05□□□□□ -2.24
CAF4P36130 YPR063CYPR063C 423 nt1.05□□□□□ -2.24
CAF4P36130 YGR130CYGR130C 2451 nt1.05□□□□□ -2.24
CAF4P36130 UFD2YDL190C 2886 nt1.04□□□□□ -2.24
CAF4P36130 DAD1YDR016C 285 nt1.04□□□□□ -2.24
CAF4P36130 BUD26YDR241W 288 nt1.04□□□□□ -2.24
CAF4P36130 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
CAF4P36130 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
CAF4P36130 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
CAF4P36130 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
CAF4P36130 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
CAF4P36130 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
CAF4P36130 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
CAF4P36130 YIR020C-BYIR020C-B 735 nt1.04□□□□□ -2.24
CAF4P36130 HHT1YBR010W 411 nt1.04□□□□□ -2.24
CAF4P36130 YJR029WYJR029W 5268 nt1.04□□□□□ -2.24
CAF4P36130 YPR137C-BYPR137C-B 5268 nt1.04□□□□□ -2.24
CAF4P36130 SNF5YBR289W 2718 nt1.04□□□□□ -2.24
CAF4P36130 CUP1-1YHR053C 186 nt1.03□□□□□ -2.24
CAF4P36130 CUP1-2YHR055C 186 nt1.03□□□□□ -2.24
CAF4P36130 YBR224WYBR224W 516 nt1.03□□□□□ -2.24
CAF4P36130 SMY1YKL079W 1971 nt1.02□□□□□ -2.25
CAF4P36130 CGI121YML036W 546 nt1.02□□□□□ -2.25
CAF4P36130 NUP188YML103C 4968 nt1.02□□□□□ -2.25
CAF4P36130 YCS4YLR272C 3531 nt1.02□□□□□ -2.25
CAF4P36130 ROM2YLR371W 4071 nt1.01□□□□□ -2.25
CAF4P36130 YDR169C-AYDR169C-A 150 nt1.01□□□□□ -2.25
CAF4P36130 YHL009W-AYHL009W-A 1242 nt1.01□□□□□ -2.25
CAF4P36130 COX3Q0275 810 nt1.01□□□□□ -2.25
CAF4P36130 YJL119CYJL119C 324 nt1.01□□□□□ -2.25
CAF4P36130 YML003WYML003W 873 nt1.01□□□□□ -2.25
CAF4P36130 YNL114CYNL114C 372 nt1.01□□□□□ -2.25
CAF4P36130 YOR376WYOR376W 369 nt1.01□□□□□ -2.25
CAF4P36130 TTI1YKL033W 3117 nt1.01□□□□□ -2.25
CAF4P36130 MUK1YPL070W 1839 nt1.01□□□□□ -2.25
CAF4P36130 YPR117WYPR117W 7470 nt1□□□□□ -2.25
CAF4P36130 SWT1YOR166C 1377 nt1□□□□□ -2.25
CAF4P36130 SEF1YBL066C 3447 nt1□□□□□ -2.25
CAF4P36130 snR59snR59 78 nt1□□□□□ -2.25
CAF4P36130 RPL40BYKR094C 387 nt1□□□□□ -2.25
CAF4P36130 YMR324CYMR324C 243 nt1□□□□□ -2.25
CAF4P36130 SCC2YDR180W 4482 nt0.99□□□□□ -2.25
CAF4P36130 DPB11YJL090C 2295 nt0.99□□□□□ -2.25
CAF4P36130 YDL211CYDL211C 1119 nt0.99□□□□□ -2.25
CAF4P36130 YFL012W-AYFL012W-A 375 nt0.99□□□□□ -2.25
CAF4P36130 YHR050W-AYHR050W-A 171 nt0.99□□□□□ -2.25
CAF4P36130 SEC22YLR268W 645 nt0.99□□□□□ -2.25
CAF4P36130 YPR146CYPR146C 330 nt0.99□□□□□ -2.25
CAF4P36130 BEM2YER155C 6504 nt0.99□□□□□ -2.25
CAF4P36130 YHR214C-CYHR214C-C 1437 nt0.98□□□□□ -2.25
CAF4P36130 PEP3YLR148W 2757 nt0.98□□□□□ -2.25
CAF4P36130 RTR2YDR066C 591 nt0.98□□□□□ -2.25
CAF4P36130 IRC2YDR112W 309 nt0.98□□□□□ -2.25
CAF4P36130 RNR4YGR180C 1038 nt0.98□□□□□ -2.25
CAF4P36130 CMC1YKL137W 336 nt0.98□□□□□ -2.25
CAF4P36130 HYM1YKL189W 1200 nt0.98□□□□□ -2.25
CAF4P36130 RPS7BYNL096C 573 nt0.98□□□□□ -2.25
CAF4P36130 NUP82YJL061W 2142 nt0.98□□□□□ -2.25
CAF4P36130 MSS11YMR164C 2277 nt0.98□□□□□ -2.25
CAF4P36130 OSH6YKR003W 1347 nt0.97□□□□□ -2.25
CAF4P36130 SHE4YOR035C 2370 nt0.97□□□□□ -2.25
CAF4P36130 LOC1YFR001W 615 nt0.97□□□□□ -2.25
CAF4P36130 POL32YJR043C 1053 nt0.97□□□□□ -2.25
CAF4P36130 YKL183C-AYKL183C-A 213 nt0.97□□□□□ -2.25
CAF4P36130 URA10YMR271C 684 nt0.97□□□□□ -2.25
CAF4P36130 BRX1YOL077C 876 nt0.97□□□□□ -2.25
CAF4P36130 SPR3YGR059W 1539 nt0.96□□□□□ -2.26
CAF4P36130 SPC1YJR010C-A 285 nt0.96□□□□□ -2.26
CAF4P36130 YNL235CYNL235C 432 nt0.96□□□□□ -2.26
CAF4P36130 SGD1YLR336C 2700 nt0.96□□□□□ -2.26
CAF4P36130 YDL068WYDL068W 330 nt0.95□□□□□ -2.26
CAF4P36130 YDR115WYDR115W 318 nt0.95□□□□□ -2.26
CAF4P36130 LSO2YGR169C-A 279 nt0.95□□□□□ -2.26
CAF4P36130 TIM8YJR135W-A 264 nt0.95□□□□□ -2.26
CAF4P36130 YLL020CYLL020C 306 nt0.95□□□□□ -2.26
CAF4P36130 CMS1YLR003C 876 nt0.95□□□□□ -2.26
CAF4P36130 YMR242W-AYMR242W-A 90 nt0.95□□□□□ -2.26
CAF4P36130 HCH1YNL281W 462 nt0.95□□□□□ -2.26
CAF4P36130 YOR161W-BYOR161W-B 261 nt0.95□□□□□ -2.26
CAF4P36130 SPR2YOR214C 711 nt0.95□□□□□ -2.26
CAF4P36130 VPS54YDR027C 2670 nt0.94□□□□□ -2.26
CAF4P36130 YDR034C-CYDR034C-C 1317 nt0.94□□□□□ -2.26
CAF4P36130 YLR410W-AYLR410W-A 1317 nt0.94□□□□□ -2.26
CAF4P36130 DOP1YDR141C 5097 nt0.94□□□□□ -2.26
CAF4P36130 YER038W-AYER038W-A 381 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 85.3 ms