Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ECHS1P30084 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ECHS1P30084 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.79■□□□□ 0.92
ECHS1P30084 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
ECHS1P30084 TPRG1LP1-201ENST00000598702 760 ntBASIC20.79■□□□□ 0.92
ECHS1P30084 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 DPP3P2-201ENST00000416030 1696 ntBASIC20.79■□□□□ 0.92
ECHS1P30084 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.79■□□□□ 0.92
ECHS1P30084 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ECHS1P30084 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ECHS1P30084 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHS1P30084 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 AC116050.2-201ENST00000612102 1779 ntBASIC20.78■□□□□ 0.92
ECHS1P30084 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 AC099791.1-201ENST00000416440 715 ntBASIC20.78■□□□□ 0.92
ECHS1P30084 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHS1P30084 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.78■□□□□ 0.92
ECHS1P30084 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ECHS1P30084 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ECHS1P30084 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.78■□□□□ 0.92
ECHS1P30084 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ECHS1P30084 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHS1P30084 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHS1P30084 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 MIR572-201ENST00000384983 95 ntBASIC20.77■□□□□ 0.92
ECHS1P30084 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.77■□□□□ 0.92
ECHS1P30084 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 AC008764.7-201ENST00000593779 1081 ntBASIC20.77■□□□□ 0.92
ECHS1P30084 AC008175.2-201ENST00000612840 297 ntBASIC20.77■□□□□ 0.92
ECHS1P30084 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ECHS1P30084 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHS1P30084 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.77■□□□□ 0.92
ECHS1P30084 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.77■□□□□ 0.92
ECHS1P30084 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ECHS1P30084 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ECHS1P30084 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ECHS1P30084 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ECHS1P30084 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ECHS1P30084 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHS1P30084 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ECHS1P30084 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ECHS1P30084 AL136116.3-201ENST00000402907 1138 ntBASIC20.76■□□□□ 0.91
ECHS1P30084 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.76■□□□□ 0.91
ECHS1P30084 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.76■□□□□ 0.91
ECHS1P30084 AL136162.1-201ENST00000607711 1078 ntBASIC20.76■□□□□ 0.91
ECHS1P30084 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ECHS1P30084 KRT16P2-201ENST00000414673 1423 ntBASIC20.76■□□□□ 0.91
ECHS1P30084 KRT8P36-201ENST00000489121 1440 ntBASIC20.76■□□□□ 0.91
ECHS1P30084 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ECHS1P30084 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms