Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ALDOA-220ENST00000566846 512 ntTSL 211.58□□□□□ -0.561e-60■■■■□ 24.6
RPS3P23396 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-8■■■■□ 24.6
RPS3P23396 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.678e-8■■■■□ 24.6
RPS3P23396 ESPN-213ENST00000632803 455 ntTSL 318.89■□□□□ 0.618e-8■■■■□ 24.6
RPS3P23396 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.68e-8■■■■□ 24.6
RPS3P23396 ESPN-210ENST00000478323 270 ntTSL 518.6■□□□□ 0.578e-8■■■■□ 24.6
RPS3P23396 ESPN-212ENST00000632593 506 ntTSL 218.59■□□□□ 0.578e-8■■■■□ 24.6
RPS3P23396 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.388e-8■■■■□ 24.6
RPS3P23396 ESPN-207ENST00000475228 813 ntTSL 516.6■□□□□ 0.258e-8■■■■□ 24.6
RPS3P23396 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.228e-8■■■■□ 24.6
RPS3P23396 MIR3917-201ENST00000580971 93 ntBASIC18.16■□□□□ 0.58e-20■■■■□ 24.5
RPS3P23396 GAPDH-210ENST00000496049 390 ntTSL 214.82□□□□□ -0.041e-29■■■■□ 24.5
RPS3P23396 NAGLU-202ENST00000586516 510 ntTSL 215.22■□□□□ 0.032e-7■■■■□ 24.5
RPS3P23396 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.182e-13■■■■□ 24.5
RPS3P23396 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.152e-13■■■■□ 24.5
RPS3P23396 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.282e-13■■■■□ 24.5
RPS3P23396 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.542e-13■■■■□ 24.5
RPS3P23396 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.892e-13■■■■□ 24.5
RPS3P23396 PTTG1-206ENST00000523659 851 ntTSL 21.04□□□□□ -2.241e-7■■■■□ 24.5
RPS3P23396 SLC16A1-204ENST00000458229 2201 ntTSL 218.78■□□□□ 0.65e-8■■■■□ 24.5
RPS3P23396 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-18■■■■□ 24.5
RPS3P23396 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.452e-18■■■■□ 24.5
RPS3P23396 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.743e-7■■■■□ 24.5
RPS3P23396 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.32■■□□□ 1.483e-7■■■■□ 24.5
RPS3P23396 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.293e-7■■■■□ 24.5
RPS3P23396 TSEN34-207ENST00000496583 2372 ntTSL 222.16■■□□□ 1.143e-7■■■■□ 24.5
RPS3P23396 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.453e-7■■■■□ 24.5
RPS3P23396 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC11.78□□□□□ -0.523e-7■■■■□ 24.5
RPS3P23396 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.342e-7■■■■□ 24.5
RPS3P23396 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.182e-7■■■■□ 24.5
RPS3P23396 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.372e-7■■■■□ 24.5
RPS3P23396 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.353e-8■■■■□ 24.5
RPS3P23396 SAC3D1-204ENST00000530213 1563 ntTSL 1 (best)23.08■■□□□ 1.293e-8■■■■□ 24.5
RPS3P23396 SAC3D1-202ENST00000528109 1518 ntTSL 1 (best)21.96■■□□□ 1.113e-8■■■■□ 24.5
RPS3P23396 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.833e-8■■■■□ 24.5
RPS3P23396 SAC3D1-203ENST00000529996 1366 ntTSL 220.14■□□□□ 0.813e-8■■■■□ 24.5
RPS3P23396 UNC45A-211ENST00000554481 553 ntTSL 418.41■□□□□ 0.543e-8■■■■□ 24.5
RPS3P23396 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.363e-8■■■■□ 24.5
RPS3P23396 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.093e-8■■■■□ 24.5
RPS3P23396 SAC3D1-206ENST00000533017 755 ntTSL 315.3■□□□□ 0.043e-8■■■■□ 24.5
RPS3P23396 ACOT7-207ENST00000473466 868 ntTSL 514.53□□□□□ -0.082e-6■■■■□ 24.5
RPS3P23396 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.263e-8■■■■□ 24.5
RPS3P23396 SAR1A-203ENST00000373239 468 ntTSL 313.42□□□□□ -0.267e-18■■■■□ 24.5
RPS3P23396 RCC1-211ENST00000478232 509 ntTSL 213.27□□□□□ -0.293e-8■■■■□ 24.5
RPS3P23396 UNC45A-214ENST00000556704 1299 ntTSL 512.85□□□□□ -0.353e-8■■■■□ 24.5
RPS3P23396 MIR4761-201ENST00000585066 82 ntBASIC11.78□□□□□ -0.523e-8■■■■□ 24.5
RPS3P23396 COPA-205ENST00000541366 616 ntTSL 211.02□□□□□ -0.653e-8■■■■□ 24.5
RPS3P23396 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC9.7□□□□□ -0.862e-9■■■■□ 24.5
RPS3P23396 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.086e-8■■■■□ 24.5
RPS3P23396 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.68□□□□□ -1.183e-8■■■■□ 24.5
RPS3P23396 CDC42-205ENST00000498236 816 ntTSL 57.6□□□□□ -1.193e-8■■■■□ 24.5
RPS3P23396 NPC1-208ENST00000590301 410 ntTSL 27.33□□□□□ -1.243e-8■■■■□ 24.5
RPS3P23396 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.82e-9■■■■□ 24.5
RPS3P23396 CPD-208ENST00000584051 575 ntTSL 53.52□□□□□ -1.853e-8■■■■□ 24.5
RPS3P23396 COPA-206ENST00000545266 574 ntTSL 21.96□□□□□ -2.13e-8■■■■□ 24.5
RPS3P23396 COPG1-206ENST00000512034 398 ntTSL 31.57□□□□□ -2.163e-8■■■■□ 24.5
RPS3P23396 KPNA2-203ENST00000579754 569 ntTSL 21.39□□□□□ -2.199e-8■■■■□ 24.5
RPS3P23396 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.323e-15■■■■□ 24.5
RPS3P23396 AFMID-212ENST00000591256 631 ntTSL 412.23□□□□□ -0.453e-15■■■■□ 24.5
RPS3P23396 AFMID-209ENST00000589107 577 ntTSL 412.23□□□□□ -0.453e-15■■■■□ 24.5
RPS3P23396 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC11.71□□□□□ -0.532e-7■■■■□ 24.5
RPS3P23396 AFMID-205ENST00000586731 550 ntTSL 3 BASIC11.71□□□□□ -0.532e-7■■■■□ 24.5
RPS3P23396 AFMID-207ENST00000588199 778 ntTSL 510.85□□□□□ -0.673e-15■■■■□ 24.5
RPS3P23396 AFMID-204ENST00000586542 569 ntTSL 410.83□□□□□ -0.683e-15■■■■□ 24.5
RPS3P23396 AFMID-208ENST00000588800 647 ntTSL 2 BASIC10.61□□□□□ -0.713e-15■■■■□ 24.5
RPS3P23396 AFMID-202ENST00000409257 1730 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.723e-15■■■■□ 24.5
RPS3P23396 AFMID-215ENST00000592988 1605 ntTSL 29.82□□□□□ -0.843e-15■■■■□ 24.5
RPS3P23396 AFMID-214ENST00000591952 582 ntTSL 2 BASIC9.24□□□□□ -0.933e-15■■■■□ 24.5
RPS3P23396 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.332e-9■■■■□ 24.5
RPS3P23396 SERPINH1-204ENST00000525611 974 ntTSL 516.89■□□□□ 0.292e-8■■■■□ 24.5
RPS3P23396 PKM-212ENST00000564440 3016 ntTSL 1 (best)8.76□□□□□ -1.019e-14■■■■□ 24.5
RPS3P23396 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.39■■□□□ 1.662e-10■■■■□ 24.5
RPS3P23396 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.06■■□□□ 1.62e-10■■■■□ 24.5
RPS3P23396 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.512e-10■■■■□ 24.5
RPS3P23396 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.28■■□□□ 1.322e-10■■■■□ 24.5
RPS3P23396 AL136531.2-201ENST00000618770 1164 ntTSL 218.02■□□□□ 0.482e-10■■■■□ 24.5
RPS3P23396 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.082e-10■■■■□ 24.5
RPS3P23396 FKBP1A-209ENST00000612074 409 ntTSL 212.15□□□□□ -0.462e-10■■■■□ 24.5
RPS3P23396 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC11.82□□□□□ -0.522e-10■■■■□ 24.5
RPS3P23396 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.862e-10■■■■□ 24.5
RPS3P23396 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.88□□□□□ -1.312e-10■■■■□ 24.5
RPS3P23396 NME2-209ENST00000573262 789 ntTSL 1 (best)9.24□□□□□ -0.938e-22■■■■□ 24.4
RPS3P23396 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.81■□□□□ 0.762e-6■■■■□ 24.4
RPS3P23396 CHURC1-FNTB-203ENST00000552941 1847 ntTSL 213.34□□□□□ -0.273e-9■■■■□ 24.4
RPS3P23396 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.89□□□□□ -0.352e-6■■■■□ 24.4
RPS3P23396 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.462e-6■■■■□ 24.4
RPS3P23396 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.52e-6■■■■□ 24.4
RPS3P23396 CHURC1-FNTB-201ENST00000549987 1468 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.743e-9■■■■□ 24.4
RPS3P23396 CHURC1-205ENST00000551947 1521 ntTSL 29.18□□□□□ -0.943e-9■■■■□ 24.4
RPS3P23396 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.993e-9■■■■□ 24.4
RPS3P23396 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC8.65□□□□□ -1.023e-9■■■■□ 24.4
RPS3P23396 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.062e-6■■■■□ 24.4
RPS3P23396 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.122e-6■■■■□ 24.4
RPS3P23396 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.94□□□□□ -1.142e-6■■■■□ 24.4
RPS3P23396 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.7□□□□□ -1.183e-9■■■■□ 24.4
RPS3P23396 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.7□□□□□ -1.183e-9■■■■□ 24.4
RPS3P23396 MATR3-210ENST00000504643 2560 ntTSL 27.46□□□□□ -1.212e-6■■■■□ 24.4
RPS3P23396 CHURC1-204ENST00000551093 1023 ntTSL 27.27□□□□□ -1.253e-9■■■■□ 24.4
RPS3P23396 CHURC1-FNTB-204ENST00000553743 207 ntTSL 26.44□□□□□ -1.383e-9■■■■□ 24.4
RPS3P23396 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.11□□□□□ -1.432e-6■■■■□ 24.4
Retrieved 100 of 24,271 protein–RNA pairs in 220.1 ms