RNA–Protein interactions for RNA: ENST00000512034.1

COPG1-206, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 398 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-206ENST00000512034 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
COPG1-206ENST00000512034 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
COPG1-206ENST00000512034 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
COPG1-206ENST00000512034 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
COPG1-206ENST00000512034 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
COPG1-206ENST00000512034 FOXD1Q16676 465 aa16.09■□□□□ 0.17
COPG1-206ENST00000512034 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
COPG1-206ENST00000512034 ADRA2BP18089 450 aa15.6■□□□□ 0.09
COPG1-206ENST00000512034 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
COPG1-206ENST00000512034 MSH5O43196 834 aa14.82□□□□□ -0.04
COPG1-206ENST00000512034 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
COPG1-206ENST00000512034 KCNA4P22459 653 aa14.38□□□□□ -0.11
COPG1-206ENST00000512034 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
COPG1-206ENST00000512034 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
COPG1-206ENST00000512034 CNKSR2Q8WXI2 1034 aa14.12□□□□□ -0.15
COPG1-206ENST00000512034 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
COPG1-206ENST00000512034 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
COPG1-206ENST00000512034 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
COPG1-206ENST00000512034 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
COPG1-206ENST00000512034 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
COPG1-206ENST00000512034 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
COPG1-206ENST00000512034 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
COPG1-206ENST00000512034 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
COPG1-206ENST00000512034 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
COPG1-206ENST00000512034 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
COPG1-206ENST00000512034 ZBTB22O15209 634 aa13.22□□□□□ -0.29
COPG1-206ENST00000512034 FOXD4L1Q9NU39 408 aa13.22□□□□□ -0.29
COPG1-206ENST00000512034 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
COPG1-206ENST00000512034 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
COPG1-206ENST00000512034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.321e-10■■□□□ 13.4
COPG1-206ENST00000512034 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
COPG1-206ENST00000512034 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
COPG1-206ENST00000512034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
COPG1-206ENST00000512034 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
COPG1-206ENST00000512034 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
COPG1-206ENST00000512034 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
COPG1-206ENST00000512034 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
COPG1-206ENST00000512034 APLP2Q06481 763 aa12.63□□□□□ -0.39
COPG1-206ENST00000512034 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
COPG1-206ENST00000512034 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
COPG1-206ENST00000512034 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
COPG1-206ENST00000512034 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
COPG1-206ENST00000512034 CAPN15O75808 1086 aa12.36□□□□□ -0.43
COPG1-206ENST00000512034 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
COPG1-206ENST00000512034 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
COPG1-206ENST00000512034 POLA2Q14181 598 aa12.19□□□□□ -0.46
COPG1-206ENST00000512034 DSG3P32926 999 aa12.13□□□□□ -0.47
COPG1-206ENST00000512034 ABCB7O75027 752 aa12.11□□□□□ -0.47
COPG1-206ENST00000512034 FBLN2P98095 1184 aa12.07□□□□□ -0.48
COPG1-206ENST00000512034 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
COPG1-206ENST00000512034 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
COPG1-206ENST00000512034 FKBP8Q14318 412 aa12.02□□□□□ -0.49
COPG1-206ENST00000512034 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
COPG1-206ENST00000512034 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
COPG1-206ENST00000512034 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
COPG1-206ENST00000512034 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
COPG1-206ENST00000512034 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
COPG1-206ENST00000512034 PROM2Q8N271 834 aa11.71□□□□□ -0.53
COPG1-206ENST00000512034 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
COPG1-206ENST00000512034 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
COPG1-206ENST00000512034 RBM42Q9BTD8 480 aaKnown RBP11.6□□□□□ -0.55
COPG1-206ENST00000512034 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
COPG1-206ENST00000512034 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPG1-206ENST00000512034 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
COPG1-206ENST00000512034 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
COPG1-206ENST00000512034 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
COPG1-206ENST00000512034 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
COPG1-206ENST00000512034 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
COPG1-206ENST00000512034 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
COPG1-206ENST00000512034 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
COPG1-206ENST00000512034 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
COPG1-206ENST00000512034 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
COPG1-206ENST00000512034 MIER1Q8N108 512 aa11.22□□□□□ -0.61
COPG1-206ENST00000512034 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
COPG1-206ENST00000512034 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
COPG1-206ENST00000512034 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
COPG1-206ENST00000512034 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
COPG1-206ENST00000512034 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
COPG1-206ENST00000512034 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
COPG1-206ENST00000512034 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
COPG1-206ENST00000512034 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
COPG1-206ENST00000512034 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
COPG1-206ENST00000512034 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
COPG1-206ENST00000512034 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
COPG1-206ENST00000512034 PKD2Q13563 968 aa10.94□□□□□ -0.66
COPG1-206ENST00000512034 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
COPG1-206ENST00000512034 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
COPG1-206ENST00000512034 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
COPG1-206ENST00000512034 NUBP1P53384 320 aa10.92□□□□□ -0.66
COPG1-206ENST00000512034 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
COPG1-206ENST00000512034 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
COPG1-206ENST00000512034 GSE1Q14687 1217 aa10.88□□□□□ -0.67
COPG1-206ENST00000512034 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
COPG1-206ENST00000512034 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
COPG1-206ENST00000512034 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
COPG1-206ENST00000512034 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
COPG1-206ENST00000512034 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
COPG1-206ENST00000512034 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
COPG1-206ENST00000512034 RGL2O15211 777 aa10.72□□□□□ -0.69
COPG1-206ENST00000512034 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms