Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCN1P20061 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCN1P20061 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.45■□□□□ 0.7
TCN1P20061 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCN1P20061 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCN1P20061 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCN1P20061 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCN1P20061 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.45■□□□□ 0.7
TCN1P20061 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCN1P20061 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TCN1P20061 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
TCN1P20061 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 AC020763.4-201ENST00000623414 4170 ntBASIC19.44■□□□□ 0.7
TCN1P20061 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TCN1P20061 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.44■□□□□ 0.7
TCN1P20061 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
TCN1P20061 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
TCN1P20061 AC011298.3-201ENST00000615796 283 ntBASIC19.44■□□□□ 0.7
TCN1P20061 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TCN1P20061 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCN1P20061 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.44■□□□□ 0.7
TCN1P20061 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TCN1P20061 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCN1P20061 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 AC009237.3-201ENST00000393279 1427 ntBASIC19.43■□□□□ 0.7
TCN1P20061 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
TCN1P20061 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
TCN1P20061 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TCN1P20061 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.43■□□□□ 0.7
TCN1P20061 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.43■□□□□ 0.7
TCN1P20061 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.43■□□□□ 0.7
TCN1P20061 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.43■□□□□ 0.7
TCN1P20061 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.43■□□□□ 0.7
TCN1P20061 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
TCN1P20061 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.43■□□□□ 0.7
TCN1P20061 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCN1P20061 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TCN1P20061 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TCN1P20061 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TCN1P20061 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TCN1P20061 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 DUX4L19-201ENST00000557448 1267 ntBASIC19.42■□□□□ 0.7
TCN1P20061 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TCN1P20061 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.42■□□□□ 0.7
TCN1P20061 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TCN1P20061 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCN1P20061 BX323043.1-201ENST00000641006 1765 ntBASIC19.42■□□□□ 0.7
TCN1P20061 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
TCN1P20061 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.41■□□□□ 0.7
TCN1P20061 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TCN1P20061 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCN1P20061 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 1248.7 ms