Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
KRT4P19013 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT4P19013 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT4P19013 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT4P19013 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
KRT4P19013 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT4P19013 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRT4P19013 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 MIR2861-201ENST00000636310 90 ntBASIC20.35■□□□□ 0.85
KRT4P19013 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
KRT4P19013 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KRT4P19013 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
KRT4P19013 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT4P19013 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT4P19013 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT4P19013 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT4P19013 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
KRT4P19013 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT4P19013 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT4P19013 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
KRT4P19013 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT4P19013 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT4P19013 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KRT4P19013 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.33■□□□□ 0.85
KRT4P19013 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.33■□□□□ 0.85
KRT4P19013 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT4P19013 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT4P19013 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
KRT4P19013 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT4P19013 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT4P19013 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
KRT4P19013 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.33■□□□□ 0.84
KRT4P19013 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.33■□□□□ 0.84
KRT4P19013 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT4P19013 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT4P19013 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 BX323043.1-201ENST00000641006 1765 ntBASIC20.32■□□□□ 0.84
KRT4P19013 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT4P19013 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT4P19013 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT4P19013 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT4P19013 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT4P19013 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT4P19013 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT4P19013 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KRT4P19013 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT4P19013 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT4P19013 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms