Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.71■□□□□ 0.59
THBS1P07996 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 AC087633.2-202ENST00000565166 1439 ntBASIC18.71■□□□□ 0.59
THBS1P07996 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
THBS1P07996 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
THBS1P07996 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
THBS1P07996 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.7■□□□□ 0.58
THBS1P07996 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.7■□□□□ 0.58
THBS1P07996 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.7■□□□□ 0.58
THBS1P07996 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 AC004911.1-201ENST00000416316 871 ntBASIC18.7■□□□□ 0.58
THBS1P07996 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.7■□□□□ 0.58
THBS1P07996 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.7■□□□□ 0.58
THBS1P07996 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.7■□□□□ 0.58
THBS1P07996 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
THBS1P07996 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.7■□□□□ 0.58
THBS1P07996 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
THBS1P07996 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
THBS1P07996 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
THBS1P07996 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.69■□□□□ 0.58
THBS1P07996 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
THBS1P07996 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.69■□□□□ 0.58
THBS1P07996 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
THBS1P07996 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.69■□□□□ 0.58
THBS1P07996 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.69■□□□□ 0.58
THBS1P07996 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.69■□□□□ 0.58
THBS1P07996 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.69■□□□□ 0.58
THBS1P07996 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
THBS1P07996 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.69■□□□□ 0.58
THBS1P07996 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
THBS1P07996 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
THBS1P07996 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.69■□□□□ 0.58
THBS1P07996 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
THBS1P07996 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
THBS1P07996 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.69■□□□□ 0.58
THBS1P07996 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 AL356652.1-201ENST00000615962 565 ntBASIC18.68■□□□□ 0.58
THBS1P07996 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
THBS1P07996 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
THBS1P07996 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THBS1P07996 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
THBS1P07996 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 CYP21A1P-202ENST00000354927 1481 ntBASIC18.67■□□□□ 0.58
THBS1P07996 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.67■□□□□ 0.58
THBS1P07996 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.67■□□□□ 0.58
THBS1P07996 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.67■□□□□ 0.58
THBS1P07996 MFSD11-216ENST00000590393 1141 ntBASIC18.67■□□□□ 0.58
THBS1P07996 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.67■□□□□ 0.58
THBS1P07996 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
THBS1P07996 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THBS1P07996 SMG8-203ENST00000578922 2178 ntBASIC18.66■□□□□ 0.58
THBS1P07996 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
THBS1P07996 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THBS1P07996 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.66■□□□□ 0.58
THBS1P07996 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.66■□□□□ 0.58
THBS1P07996 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms